Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
CLCF1Q9UBD9 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLCF1Q9UBD9 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLCF1Q9UBD9 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLCF1Q9UBD9 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLCF1Q9UBD9 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLCF1Q9UBD9 AL450487.1-201ENST00000426799 995 ntBASIC16.29■□□□□ 0.2
CLCF1Q9UBD9 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC16.29■□□□□ 0.2
CLCF1Q9UBD9 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CLCF1Q9UBD9 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC16.29■□□□□ 0.2
CLCF1Q9UBD9 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC16.29■□□□□ 0.2
CLCF1Q9UBD9 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC16.29■□□□□ 0.2
CLCF1Q9UBD9 PRR29-207ENST00000580752 458 ntTSL 3 BASIC16.29■□□□□ 0.2
CLCF1Q9UBD9 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLCF1Q9UBD9 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLCF1Q9UBD9 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC16.29■□□□□ 0.2
CLCF1Q9UBD9 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
CLCF1Q9UBD9 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLCF1Q9UBD9 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CLCF1Q9UBD9 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CLCF1Q9UBD9 AL024508.2-201ENST00000607749 1894 ntBASIC16.29■□□□□ 0.2
CLCF1Q9UBD9 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLCF1Q9UBD9 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLCF1Q9UBD9 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC16.28■□□□□ 0.2
CLCF1Q9UBD9 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC16.28■□□□□ 0.2
CLCF1Q9UBD9 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CLCF1Q9UBD9 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLCF1Q9UBD9 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLCF1Q9UBD9 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLCF1Q9UBD9 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CLCF1Q9UBD9 SNCG-201ENST00000348795 684 ntTSL 2 BASIC16.28■□□□□ 0.2
CLCF1Q9UBD9 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
CLCF1Q9UBD9 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC16.28■□□□□ 0.2
CLCF1Q9UBD9 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CLCF1Q9UBD9 LINC00265-3P-201ENST00000447588 903 ntBASIC16.28■□□□□ 0.2
CLCF1Q9UBD9 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC16.28■□□□□ 0.2
CLCF1Q9UBD9 AC113404.2-201ENST00000507884 177 ntBASIC16.28■□□□□ 0.2
CLCF1Q9UBD9 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC16.28■□□□□ 0.2
CLCF1Q9UBD9 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC16.28■□□□□ 0.2
CLCF1Q9UBD9 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC16.28■□□□□ 0.2
CLCF1Q9UBD9 AL592071.1-201ENST00000611956 408 ntBASIC16.28■□□□□ 0.2
CLCF1Q9UBD9 AC004263.2-201ENST00000617183 678 ntBASIC16.28■□□□□ 0.2
CLCF1Q9UBD9 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CLCF1Q9UBD9 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC16.28■□□□□ 0.2
CLCF1Q9UBD9 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLCF1Q9UBD9 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CLCF1Q9UBD9 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLCF1Q9UBD9 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLCF1Q9UBD9 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CLCF1Q9UBD9 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.28■□□□□ 0.2
CLCF1Q9UBD9 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CLCF1Q9UBD9 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CLCF1Q9UBD9 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLCF1Q9UBD9 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLCF1Q9UBD9 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CLCF1Q9UBD9 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
CLCF1Q9UBD9 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC16.27■□□□□ 0.2
CLCF1Q9UBD9 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
CLCF1Q9UBD9 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLCF1Q9UBD9 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLCF1Q9UBD9 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLCF1Q9UBD9 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC16.27■□□□□ 0.2
CLCF1Q9UBD9 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC16.27■□□□□ 0.2
CLCF1Q9UBD9 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC16.27■□□□□ 0.2
CLCF1Q9UBD9 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLCF1Q9UBD9 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CLCF1Q9UBD9 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLCF1Q9UBD9 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC16.27■□□□□ 0.2
CLCF1Q9UBD9 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLCF1Q9UBD9 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLCF1Q9UBD9 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC16.27■□□□□ 0.2
CLCF1Q9UBD9 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLCF1Q9UBD9 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLCF1Q9UBD9 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC16.27■□□□□ 0.2
CLCF1Q9UBD9 TOB2P1-201ENST00000469761 992 ntBASIC16.27■□□□□ 0.2
CLCF1Q9UBD9 RN7SL606P-201ENST00000472779 293 ntBASIC16.27■□□□□ 0.2
CLCF1Q9UBD9 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC16.27■□□□□ 0.2
CLCF1Q9UBD9 PRELID1P1-202ENST00000567272 903 ntBASIC16.27■□□□□ 0.2
CLCF1Q9UBD9 IGHV3-41-201ENST00000613121 348 ntBASIC16.27■□□□□ 0.2
CLCF1Q9UBD9 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.27■□□□□ 0.2
CLCF1Q9UBD9 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC16.27■□□□□ 0.2
CLCF1Q9UBD9 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CLCF1Q9UBD9 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CLCF1Q9UBD9 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CLCF1Q9UBD9 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
CLCF1Q9UBD9 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLCF1Q9UBD9 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLCF1Q9UBD9 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLCF1Q9UBD9 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLCF1Q9UBD9 AL031598.1-201ENST00000561511 1773 ntBASIC16.26■□□□□ 0.19
CLCF1Q9UBD9 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CLCF1Q9UBD9 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CLCF1Q9UBD9 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
CLCF1Q9UBD9 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLCF1Q9UBD9 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLCF1Q9UBD9 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CLCF1Q9UBD9 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.26■□□□□ 0.19
CLCF1Q9UBD9 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLCF1Q9UBD9 DDT-203ENST00000403754 569 ntTSL 3 BASIC16.26■□□□□ 0.19
CLCF1Q9UBD9 DDT-206ENST00000430101 573 ntTSL 2 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms