Protein–RNA interactions for Protein: Q9NYD6

HOXC10, Homeobox protein Hox-C10, humanhuman

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC10Q9NYD6 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
HOXC10Q9NYD6 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
HOXC10Q9NYD6 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HOXC10Q9NYD6 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HOXC10Q9NYD6 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.96■□□□□ 0.95
HOXC10Q9NYD6 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
HOXC10Q9NYD6 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HOXC10Q9NYD6 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HOXC10Q9NYD6 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HOXC10Q9NYD6 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.95
HOXC10Q9NYD6 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.95■□□□□ 0.94
HOXC10Q9NYD6 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HOXC10Q9NYD6 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
HOXC10Q9NYD6 PTGES2-AS1-201ENST00000443493 2100 ntBASIC20.95■□□□□ 0.94
HOXC10Q9NYD6 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HOXC10Q9NYD6 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HOXC10Q9NYD6 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HOXC10Q9NYD6 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
HOXC10Q9NYD6 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC20.95■□□□□ 0.94
HOXC10Q9NYD6 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC20.95■□□□□ 0.94
HOXC10Q9NYD6 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC20.95■□□□□ 0.94
HOXC10Q9NYD6 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC20.95■□□□□ 0.94
HOXC10Q9NYD6 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC20.95■□□□□ 0.94
HOXC10Q9NYD6 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC20.95■□□□□ 0.94
HOXC10Q9NYD6 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
HOXC10Q9NYD6 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC20.95■□□□□ 0.94
HOXC10Q9NYD6 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC20.95■□□□□ 0.94
HOXC10Q9NYD6 AC008608.2-201ENST00000606089 416 ntBASIC20.95■□□□□ 0.94
HOXC10Q9NYD6 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC20.95■□□□□ 0.94
HOXC10Q9NYD6 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC20.95■□□□□ 0.94
HOXC10Q9NYD6 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC20.95■□□□□ 0.94
HOXC10Q9NYD6 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
HOXC10Q9NYD6 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC20.95■□□□□ 0.94
HOXC10Q9NYD6 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
HOXC10Q9NYD6 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC20.95■□□□□ 0.94
HOXC10Q9NYD6 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
HOXC10Q9NYD6 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
HOXC10Q9NYD6 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC20.95■□□□□ 0.94
HOXC10Q9NYD6 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.95■□□□□ 0.94
HOXC10Q9NYD6 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC20.94■□□□□ 0.94
HOXC10Q9NYD6 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
HOXC10Q9NYD6 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
HOXC10Q9NYD6 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.94■□□□□ 0.94
HOXC10Q9NYD6 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HOXC10Q9NYD6 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
HOXC10Q9NYD6 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
HOXC10Q9NYD6 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HOXC10Q9NYD6 TLE1-202ENST00000376484 666 ntTSL 3 BASIC20.94■□□□□ 0.94
HOXC10Q9NYD6 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC20.94■□□□□ 0.94
HOXC10Q9NYD6 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC20.94■□□□□ 0.94
HOXC10Q9NYD6 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
HOXC10Q9NYD6 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
HOXC10Q9NYD6 AL031284.1-201ENST00000419297 478 ntBASIC20.94■□□□□ 0.94
HOXC10Q9NYD6 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HOXC10Q9NYD6 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC20.94■□□□□ 0.94
HOXC10Q9NYD6 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HOXC10Q9NYD6 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
HOXC10Q9NYD6 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
HOXC10Q9NYD6 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
HOXC10Q9NYD6 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC20.94■□□□□ 0.94
HOXC10Q9NYD6 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
HOXC10Q9NYD6 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC20.94■□□□□ 0.94
HOXC10Q9NYD6 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC20.94■□□□□ 0.94
HOXC10Q9NYD6 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HOXC10Q9NYD6 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC20.93■□□□□ 0.94
HOXC10Q9NYD6 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
HOXC10Q9NYD6 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.93■□□□□ 0.94
HOXC10Q9NYD6 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
HOXC10Q9NYD6 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.93■□□□□ 0.94
HOXC10Q9NYD6 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
HOXC10Q9NYD6 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.93■□□□□ 0.94
HOXC10Q9NYD6 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
HOXC10Q9NYD6 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
HOXC10Q9NYD6 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HOXC10Q9NYD6 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
HOXC10Q9NYD6 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
HOXC10Q9NYD6 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HOXC10Q9NYD6 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC20.93■□□□□ 0.94
HOXC10Q9NYD6 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC20.93■□□□□ 0.94
HOXC10Q9NYD6 AL355877.3-201ENST00000622820 899 ntBASIC20.93■□□□□ 0.94
HOXC10Q9NYD6 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
HOXC10Q9NYD6 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
HOXC10Q9NYD6 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC20.93■□□□□ 0.94
HOXC10Q9NYD6 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
HOXC10Q9NYD6 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
HOXC10Q9NYD6 LINC00602-201ENST00000629776 2065 ntBASIC20.93■□□□□ 0.94
HOXC10Q9NYD6 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
HOXC10Q9NYD6 ADK-206ENST00000541550 2222 ntTSL 2 BASIC20.93■□□□□ 0.94
HOXC10Q9NYD6 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
HOXC10Q9NYD6 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC20.93■□□□□ 0.94
HOXC10Q9NYD6 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HOXC10Q9NYD6 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HOXC10Q9NYD6 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC20.93■□□□□ 0.94
HOXC10Q9NYD6 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC20.92■□□□□ 0.94
HOXC10Q9NYD6 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
HOXC10Q9NYD6 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HOXC10Q9NYD6 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
HOXC10Q9NYD6 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HOXC10Q9NYD6 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
HOXC10Q9NYD6 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms