Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
NEUROD4Q9HD90 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
NEUROD4Q9HD90 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NEUROD4Q9HD90 ESPNP-201ENST00000270691 2015 ntBASIC17.34■□□□□ 0.37
NEUROD4Q9HD90 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NEUROD4Q9HD90 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.34■□□□□ 0.37
NEUROD4Q9HD90 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NEUROD4Q9HD90 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NEUROD4Q9HD90 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NEUROD4Q9HD90 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NEUROD4Q9HD90 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
NEUROD4Q9HD90 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.34■□□□□ 0.37
NEUROD4Q9HD90 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
NEUROD4Q9HD90 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
NEUROD4Q9HD90 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC17.34■□□□□ 0.37
NEUROD4Q9HD90 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
NEUROD4Q9HD90 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC17.34■□□□□ 0.37
NEUROD4Q9HD90 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NEUROD4Q9HD90 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
NEUROD4Q9HD90 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC17.34■□□□□ 0.37
NEUROD4Q9HD90 PPOX-219ENST00000544598 813 ntTSL 2 BASIC17.34■□□□□ 0.37
NEUROD4Q9HD90 AC092338.2-201ENST00000568827 1415 ntBASIC17.34■□□□□ 0.37
NEUROD4Q9HD90 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
NEUROD4Q9HD90 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
NEUROD4Q9HD90 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
NEUROD4Q9HD90 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
NEUROD4Q9HD90 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NEUROD4Q9HD90 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
NEUROD4Q9HD90 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.34■□□□□ 0.37
NEUROD4Q9HD90 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
NEUROD4Q9HD90 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.33■□□□□ 0.37
NEUROD4Q9HD90 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.33■□□□□ 0.37
NEUROD4Q9HD90 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
NEUROD4Q9HD90 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
NEUROD4Q9HD90 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
NEUROD4Q9HD90 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
NEUROD4Q9HD90 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
NEUROD4Q9HD90 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
NEUROD4Q9HD90 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
NEUROD4Q9HD90 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
NEUROD4Q9HD90 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
NEUROD4Q9HD90 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.33■□□□□ 0.37
NEUROD4Q9HD90 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.33■□□□□ 0.37
NEUROD4Q9HD90 AC018470.1-201ENST00000624790 3129 ntBASIC17.33■□□□□ 0.37
NEUROD4Q9HD90 AC009102.3-201ENST00000623118 1491 ntBASIC17.33■□□□□ 0.37
NEUROD4Q9HD90 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NEUROD4Q9HD90 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
NEUROD4Q9HD90 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
NEUROD4Q9HD90 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
NEUROD4Q9HD90 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
NEUROD4Q9HD90 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.33■□□□□ 0.36
NEUROD4Q9HD90 MIR149-201ENST00000384879 89 ntBASIC17.33■□□□□ 0.36
NEUROD4Q9HD90 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
NEUROD4Q9HD90 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.33■□□□□ 0.36
NEUROD4Q9HD90 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.33■□□□□ 0.36
NEUROD4Q9HD90 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC17.33■□□□□ 0.36
NEUROD4Q9HD90 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.33■□□□□ 0.36
NEUROD4Q9HD90 SNX21-213ENST00000614929 587 ntTSL 5 BASIC17.33■□□□□ 0.36
NEUROD4Q9HD90 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.33■□□□□ 0.36
NEUROD4Q9HD90 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.33■□□□□ 0.36
NEUROD4Q9HD90 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
NEUROD4Q9HD90 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
NEUROD4Q9HD90 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
NEUROD4Q9HD90 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.33■□□□□ 0.36
NEUROD4Q9HD90 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NEUROD4Q9HD90 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.33■□□□□ 0.36
NEUROD4Q9HD90 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
NEUROD4Q9HD90 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
NEUROD4Q9HD90 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
NEUROD4Q9HD90 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NEUROD4Q9HD90 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NEUROD4Q9HD90 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NEUROD4Q9HD90 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NEUROD4Q9HD90 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.32■□□□□ 0.36
NEUROD4Q9HD90 AL163051.1-201ENST00000569214 1512 ntBASIC17.32■□□□□ 0.36
NEUROD4Q9HD90 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NEUROD4Q9HD90 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
NEUROD4Q9HD90 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.32■□□□□ 0.36
NEUROD4Q9HD90 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NEUROD4Q9HD90 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NEUROD4Q9HD90 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NEUROD4Q9HD90 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NEUROD4Q9HD90 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
NEUROD4Q9HD90 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NEUROD4Q9HD90 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
NEUROD4Q9HD90 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17.32■□□□□ 0.36
NEUROD4Q9HD90 KRT18P23-201ENST00000435622 1283 ntBASIC17.32■□□□□ 0.36
NEUROD4Q9HD90 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.32■□□□□ 0.36
NEUROD4Q9HD90 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC17.32■□□□□ 0.36
NEUROD4Q9HD90 AC010653.2-201ENST00000623505 997 ntBASIC17.32■□□□□ 0.36
NEUROD4Q9HD90 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.32■□□□□ 0.36
NEUROD4Q9HD90 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NEUROD4Q9HD90 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NEUROD4Q9HD90 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.32■□□□□ 0.36
NEUROD4Q9HD90 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.32■□□□□ 0.36
NEUROD4Q9HD90 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
NEUROD4Q9HD90 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
NEUROD4Q9HD90 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.32■□□□□ 0.36
NEUROD4Q9HD90 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NEUROD4Q9HD90 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms