Protein–RNA interactions for Protein: Q9H6U6

BCAS3, Breast carcinoma-amplified sequence 3, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS3Q9H6U6 AC233702.3-201ENST00000578656 1387 ntBASIC20.59■□□□□ 0.89
BCAS3Q9H6U6 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC20.59■□□□□ 0.89
BCAS3Q9H6U6 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC20.59■□□□□ 0.89
BCAS3Q9H6U6 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
BCAS3Q9H6U6 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
BCAS3Q9H6U6 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.59■□□□□ 0.89
BCAS3Q9H6U6 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
BCAS3Q9H6U6 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
BCAS3Q9H6U6 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
BCAS3Q9H6U6 MIR149-201ENST00000384879 89 ntBASIC20.59■□□□□ 0.89
BCAS3Q9H6U6 AC246785.2-201ENST00000432512 513 ntBASIC20.59■□□□□ 0.89
BCAS3Q9H6U6 NUS1P1-201ENST00000446295 882 ntBASIC20.59■□□□□ 0.89
BCAS3Q9H6U6 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
BCAS3Q9H6U6 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
BCAS3Q9H6U6 PPOX-214ENST00000535223 664 ntTSL 3 BASIC20.59■□□□□ 0.89
BCAS3Q9H6U6 AC090616.6-201ENST00000582640 721 ntBASIC20.59■□□□□ 0.89
BCAS3Q9H6U6 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
BCAS3Q9H6U6 AL592071.1-201ENST00000611956 408 ntBASIC20.59■□□□□ 0.89
BCAS3Q9H6U6 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
BCAS3Q9H6U6 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
BCAS3Q9H6U6 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
BCAS3Q9H6U6 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
BCAS3Q9H6U6 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
BCAS3Q9H6U6 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC20.59■□□□□ 0.89
BCAS3Q9H6U6 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
BCAS3Q9H6U6 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
BCAS3Q9H6U6 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
BCAS3Q9H6U6 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC20.58■□□□□ 0.89
BCAS3Q9H6U6 AL024508.2-201ENST00000607749 1894 ntBASIC20.58■□□□□ 0.89
BCAS3Q9H6U6 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
BCAS3Q9H6U6 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
BCAS3Q9H6U6 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
BCAS3Q9H6U6 AC009102.3-201ENST00000623118 1491 ntBASIC20.58■□□□□ 0.89
BCAS3Q9H6U6 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
BCAS3Q9H6U6 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
BCAS3Q9H6U6 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
BCAS3Q9H6U6 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
BCAS3Q9H6U6 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
BCAS3Q9H6U6 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC20.58■□□□□ 0.89
BCAS3Q9H6U6 AL691432.3-201ENST00000621860 400 ntBASIC20.58■□□□□ 0.89
BCAS3Q9H6U6 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC20.58■□□□□ 0.89
BCAS3Q9H6U6 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC20.58■□□□□ 0.89
BCAS3Q9H6U6 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC20.58■□□□□ 0.89
BCAS3Q9H6U6 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
BCAS3Q9H6U6 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC20.58■□□□□ 0.89
BCAS3Q9H6U6 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
BCAS3Q9H6U6 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
BCAS3Q9H6U6 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
BCAS3Q9H6U6 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.88
BCAS3Q9H6U6 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC20.58■□□□□ 0.88
BCAS3Q9H6U6 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
BCAS3Q9H6U6 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
BCAS3Q9H6U6 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
BCAS3Q9H6U6 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC20.58■□□□□ 0.88
BCAS3Q9H6U6 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
BCAS3Q9H6U6 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC20.58■□□□□ 0.88
BCAS3Q9H6U6 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
BCAS3Q9H6U6 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
BCAS3Q9H6U6 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
BCAS3Q9H6U6 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
BCAS3Q9H6U6 LINC01126-201ENST00000623515 1646 ntBASIC20.57■□□□□ 0.88
BCAS3Q9H6U6 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC20.57■□□□□ 0.88
BCAS3Q9H6U6 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
BCAS3Q9H6U6 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
BCAS3Q9H6U6 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
BCAS3Q9H6U6 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
BCAS3Q9H6U6 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
BCAS3Q9H6U6 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC20.57■□□□□ 0.88
BCAS3Q9H6U6 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC20.57■□□□□ 0.88
BCAS3Q9H6U6 TSPY19P-201ENST00000418461 509 ntBASIC20.57■□□□□ 0.88
BCAS3Q9H6U6 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC20.57■□□□□ 0.88
BCAS3Q9H6U6 TPM4P1-201ENST00000436100 807 ntBASIC20.57■□□□□ 0.88
BCAS3Q9H6U6 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
BCAS3Q9H6U6 TSPY18P-201ENST00000441642 509 ntBASIC20.57■□□□□ 0.88
BCAS3Q9H6U6 BET1L-206ENST00000486280 665 ntTSL 3 BASIC20.57■□□□□ 0.88
BCAS3Q9H6U6 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC20.57■□□□□ 0.88
BCAS3Q9H6U6 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
BCAS3Q9H6U6 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC20.57■□□□□ 0.88
BCAS3Q9H6U6 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC20.57■□□□□ 0.88
BCAS3Q9H6U6 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC20.57■□□□□ 0.88
BCAS3Q9H6U6 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC20.57■□□□□ 0.88
BCAS3Q9H6U6 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC20.57■□□□□ 0.88
BCAS3Q9H6U6 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
BCAS3Q9H6U6 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
BCAS3Q9H6U6 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC20.57■□□□□ 0.88
BCAS3Q9H6U6 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
BCAS3Q9H6U6 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
BCAS3Q9H6U6 KRT89P-201ENST00000620027 1478 ntBASIC20.56■□□□□ 0.88
BCAS3Q9H6U6 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
BCAS3Q9H6U6 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC20.56■□□□□ 0.88
BCAS3Q9H6U6 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.56■□□□□ 0.88
BCAS3Q9H6U6 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
BCAS3Q9H6U6 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC20.56■□□□□ 0.88
BCAS3Q9H6U6 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC20.56■□□□□ 0.88
BCAS3Q9H6U6 IGHV3-47-201ENST00000425060 335 ntBASIC20.56■□□□□ 0.88
BCAS3Q9H6U6 EMBP1-201ENST00000458200 901 ntBASIC20.56■□□□□ 0.88
BCAS3Q9H6U6 AC074051.2-201ENST00000565115 352 ntBASIC20.56■□□□□ 0.88
BCAS3Q9H6U6 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
BCAS3Q9H6U6 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
BCAS3Q9H6U6 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms