Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
LITAFQ99732 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.45
LITAFQ99732 KRT8P3-201ENST00000519669 1449 ntBASIC12.21□□□□□ -0.45
LITAFQ99732 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
LITAFQ99732 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC12.21□□□□□ -0.45
LITAFQ99732 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
LITAFQ99732 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC12.21□□□□□ -0.45
LITAFQ99732 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
LITAFQ99732 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC12.21□□□□□ -0.45
LITAFQ99732 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
LITAFQ99732 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
LITAFQ99732 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
LITAFQ99732 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
LITAFQ99732 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
LITAFQ99732 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
LITAFQ99732 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
LITAFQ99732 HYI-206ENST00000372434 1025 ntTSL 5 BASIC12.21□□□□□ -0.45
LITAFQ99732 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC12.21□□□□□ -0.45
LITAFQ99732 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
LITAFQ99732 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
LITAFQ99732 CFL2-205ENST00000555765 632 ntTSL 2 BASIC12.21□□□□□ -0.45
LITAFQ99732 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC12.21□□□□□ -0.45
LITAFQ99732 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC12.21□□□□□ -0.45
LITAFQ99732 RAP2CP1-201ENST00000605103 478 ntBASIC12.21□□□□□ -0.45
LITAFQ99732 OS9-205ENST00000413095 1660 ntTSL 2 BASIC12.21□□□□□ -0.45
LITAFQ99732 AC133963.1-201ENST00000504166 1679 ntBASIC12.21□□□□□ -0.45
LITAFQ99732 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
LITAFQ99732 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
LITAFQ99732 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC12.21□□□□□ -0.45
LITAFQ99732 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
LITAFQ99732 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
LITAFQ99732 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
LITAFQ99732 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
LITAFQ99732 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC12.21□□□□□ -0.46
LITAFQ99732 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
LITAFQ99732 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
LITAFQ99732 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
LITAFQ99732 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
LITAFQ99732 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.46
LITAFQ99732 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
LITAFQ99732 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
LITAFQ99732 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
LITAFQ99732 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
LITAFQ99732 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
LITAFQ99732 KRT8P41-201ENST00000533985 1514 ntBASIC12.21□□□□□ -0.46
LITAFQ99732 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
LITAFQ99732 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
LITAFQ99732 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC12.21□□□□□ -0.46
LITAFQ99732 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
LITAFQ99732 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC12.21□□□□□ -0.46
LITAFQ99732 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC12.2□□□□□ -0.46
LITAFQ99732 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
LITAFQ99732 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
LITAFQ99732 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
LITAFQ99732 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
LITAFQ99732 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
LITAFQ99732 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
LITAFQ99732 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
LITAFQ99732 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
LITAFQ99732 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
LITAFQ99732 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
LITAFQ99732 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC12.2□□□□□ -0.46
LITAFQ99732 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC12.2□□□□□ -0.46
LITAFQ99732 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
LITAFQ99732 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC12.2□□□□□ -0.46
LITAFQ99732 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
LITAFQ99732 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
LITAFQ99732 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
LITAFQ99732 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC12.2□□□□□ -0.46
LITAFQ99732 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC12.2□□□□□ -0.46
LITAFQ99732 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
LITAFQ99732 GGT1-206ENST00000404223 952 ntTSL 2 BASIC12.2□□□□□ -0.46
LITAFQ99732 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC12.2□□□□□ -0.46
LITAFQ99732 KRT18P11-201ENST00000435214 1283 ntBASIC12.2□□□□□ -0.46
LITAFQ99732 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC12.2□□□□□ -0.46
LITAFQ99732 SPI1-203ENST00000533030 661 ntTSL 2 BASIC12.2□□□□□ -0.46
LITAFQ99732 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
LITAFQ99732 DUX4L16-201ENST00000555130 1264 ntBASIC12.2□□□□□ -0.46
LITAFQ99732 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC12.2□□□□□ -0.46
LITAFQ99732 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC12.2□□□□□ -0.46
LITAFQ99732 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
LITAFQ99732 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC12.2□□□□□ -0.46
LITAFQ99732 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC12.2□□□□□ -0.46
LITAFQ99732 SP2-202ENST00000613139 908 ntTSL 5 BASIC12.2□□□□□ -0.46
LITAFQ99732 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
LITAFQ99732 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
LITAFQ99732 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC12.2□□□□□ -0.46
LITAFQ99732 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
LITAFQ99732 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC12.2□□□□□ -0.46
LITAFQ99732 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
LITAFQ99732 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
LITAFQ99732 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC12.2□□□□□ -0.46
LITAFQ99732 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC12.2□□□□□ -0.46
LITAFQ99732 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
LITAFQ99732 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC12.2□□□□□ -0.46
LITAFQ99732 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC12.2□□□□□ -0.46
LITAFQ99732 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
LITAFQ99732 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC12.2□□□□□ -0.46
LITAFQ99732 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
LITAFQ99732 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC12.2□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms