Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CDK5RAP1Q96SZ6 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC19■□□□□ 0.63
CDK5RAP1Q96SZ6 GMCL1P1-201ENST00000463439 1581 ntBASIC19■□□□□ 0.63
CDK5RAP1Q96SZ6 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19■□□□□ 0.63
CDK5RAP1Q96SZ6 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
CDK5RAP1Q96SZ6 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
CDK5RAP1Q96SZ6 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
CDK5RAP1Q96SZ6 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CDK5RAP1Q96SZ6 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19■□□□□ 0.63
CDK5RAP1Q96SZ6 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CDK5RAP1Q96SZ6 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CDK5RAP1Q96SZ6 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19■□□□□ 0.63
CDK5RAP1Q96SZ6 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDK5RAP1Q96SZ6 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDK5RAP1Q96SZ6 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDK5RAP1Q96SZ6 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDK5RAP1Q96SZ6 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.99■□□□□ 0.63
CDK5RAP1Q96SZ6 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
CDK5RAP1Q96SZ6 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDK5RAP1Q96SZ6 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.99■□□□□ 0.63
CDK5RAP1Q96SZ6 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.99■□□□□ 0.63
CDK5RAP1Q96SZ6 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
CDK5RAP1Q96SZ6 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
CDK5RAP1Q96SZ6 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDK5RAP1Q96SZ6 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDK5RAP1Q96SZ6 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDK5RAP1Q96SZ6 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDK5RAP1Q96SZ6 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.99■□□□□ 0.63
CDK5RAP1Q96SZ6 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC18.99■□□□□ 0.63
CDK5RAP1Q96SZ6 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC18.99■□□□□ 0.63
CDK5RAP1Q96SZ6 DRAXINP1-201ENST00000437611 948 ntBASIC18.99■□□□□ 0.63
CDK5RAP1Q96SZ6 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
CDK5RAP1Q96SZ6 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC18.99■□□□□ 0.63
CDK5RAP1Q96SZ6 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC18.99■□□□□ 0.63
CDK5RAP1Q96SZ6 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC18.99■□□□□ 0.63
CDK5RAP1Q96SZ6 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CDK5RAP1Q96SZ6 KRT18P56-201ENST00000507275 550 ntBASIC18.99■□□□□ 0.63
CDK5RAP1Q96SZ6 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CDK5RAP1Q96SZ6 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC18.99■□□□□ 0.63
CDK5RAP1Q96SZ6 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC18.99■□□□□ 0.63
CDK5RAP1Q96SZ6 IGHV3-41-201ENST00000613121 348 ntBASIC18.99■□□□□ 0.63
CDK5RAP1Q96SZ6 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC18.99■□□□□ 0.63
CDK5RAP1Q96SZ6 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC18.99■□□□□ 0.63
CDK5RAP1Q96SZ6 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC18.99■□□□□ 0.63
CDK5RAP1Q96SZ6 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CDK5RAP1Q96SZ6 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDK5RAP1Q96SZ6 AL020996.1-203ENST00000536896 2307 ntBASIC18.99■□□□□ 0.63
CDK5RAP1Q96SZ6 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDK5RAP1Q96SZ6 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDK5RAP1Q96SZ6 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDK5RAP1Q96SZ6 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDK5RAP1Q96SZ6 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
CDK5RAP1Q96SZ6 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDK5RAP1Q96SZ6 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CDK5RAP1Q96SZ6 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CDK5RAP1Q96SZ6 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDK5RAP1Q96SZ6 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDK5RAP1Q96SZ6 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC18.98■□□□□ 0.63
CDK5RAP1Q96SZ6 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CDK5RAP1Q96SZ6 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC18.98■□□□□ 0.63
CDK5RAP1Q96SZ6 AP002414.4-201ENST00000589764 1148 ntBASIC18.98■□□□□ 0.63
CDK5RAP1Q96SZ6 IL11-204ENST00000590625 1028 ntTSL 2 BASIC18.98■□□□□ 0.63
CDK5RAP1Q96SZ6 AC092119.3-201ENST00000612618 583 ntBASIC18.98■□□□□ 0.63
CDK5RAP1Q96SZ6 BCL2-203ENST00000589955 5011 ntBASIC18.98■□□□□ 0.63
CDK5RAP1Q96SZ6 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDK5RAP1Q96SZ6 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDK5RAP1Q96SZ6 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.98■□□□□ 0.63
CDK5RAP1Q96SZ6 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDK5RAP1Q96SZ6 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDK5RAP1Q96SZ6 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDK5RAP1Q96SZ6 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
CDK5RAP1Q96SZ6 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CDK5RAP1Q96SZ6 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CDK5RAP1Q96SZ6 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CDK5RAP1Q96SZ6 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
CDK5RAP1Q96SZ6 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDK5RAP1Q96SZ6 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDK5RAP1Q96SZ6 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDK5RAP1Q96SZ6 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDK5RAP1Q96SZ6 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.97■□□□□ 0.63
CDK5RAP1Q96SZ6 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18.97■□□□□ 0.63
CDK5RAP1Q96SZ6 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDK5RAP1Q96SZ6 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
CDK5RAP1Q96SZ6 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDK5RAP1Q96SZ6 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC18.97■□□□□ 0.63
CDK5RAP1Q96SZ6 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC18.97■□□□□ 0.63
CDK5RAP1Q96SZ6 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.97■□□□□ 0.63
CDK5RAP1Q96SZ6 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CDK5RAP1Q96SZ6 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
CDK5RAP1Q96SZ6 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDK5RAP1Q96SZ6 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDK5RAP1Q96SZ6 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDK5RAP1Q96SZ6 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDK5RAP1Q96SZ6 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDK5RAP1Q96SZ6 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDK5RAP1Q96SZ6 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CDK5RAP1Q96SZ6 AP002383.4-201ENST00000442518 975 ntBASIC18.97■□□□□ 0.63
CDK5RAP1Q96SZ6 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDK5RAP1Q96SZ6 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC18.97■□□□□ 0.63
CDK5RAP1Q96SZ6 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms