Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 KRT18P1-202ENST00000452408 1331 ntBASIC19.76■□□□□ 0.75
SNX27Q96L92 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.76■□□□□ 0.75
SNX27Q96L92 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SNX27Q96L92 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SNX27Q96L92 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SNX27Q96L92 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SNX27Q96L92 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC19.75■□□□□ 0.75
SNX27Q96L92 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SNX27Q96L92 NARF-204ENST00000390006 1766 ntTSL 2 BASIC19.75■□□□□ 0.75
SNX27Q96L92 AC098818.2-201ENST00000564925 2320 ntBASIC19.75■□□□□ 0.75
SNX27Q96L92 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SNX27Q96L92 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SNX27Q96L92 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
SNX27Q96L92 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SNX27Q96L92 DRAXINP1-201ENST00000437611 948 ntBASIC19.75■□□□□ 0.75
SNX27Q96L92 FAAHP1-202ENST00000446499 1238 ntBASIC19.75■□□□□ 0.75
SNX27Q96L92 AC113404.2-201ENST00000507884 177 ntBASIC19.75■□□□□ 0.75
SNX27Q96L92 TPSP2-201ENST00000561760 610 ntBASIC19.75■□□□□ 0.75
SNX27Q96L92 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
SNX27Q96L92 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC19.75■□□□□ 0.75
SNX27Q96L92 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
SNX27Q96L92 AC090616.6-201ENST00000582640 721 ntBASIC19.75■□□□□ 0.75
SNX27Q96L92 GXYLT1P4-201ENST00000613576 1192 ntBASIC19.75■□□□□ 0.75
SNX27Q96L92 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
SNX27Q96L92 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SNX27Q96L92 LINC01126-201ENST00000623515 1646 ntBASIC19.75■□□□□ 0.75
SNX27Q96L92 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.75■□□□□ 0.75
SNX27Q96L92 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
SNX27Q96L92 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SNX27Q96L92 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
SNX27Q96L92 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC19.75■□□□□ 0.75
SNX27Q96L92 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
SNX27Q96L92 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SNX27Q96L92 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SNX27Q96L92 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SNX27Q96L92 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SNX27Q96L92 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
SNX27Q96L92 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
SNX27Q96L92 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SNX27Q96L92 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SNX27Q96L92 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SNX27Q96L92 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC19.74■□□□□ 0.75
SNX27Q96L92 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
SNX27Q96L92 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SNX27Q96L92 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
SNX27Q96L92 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SNX27Q96L92 CIB2-208ENST00000560618 804 ntTSL 2 BASIC19.74■□□□□ 0.75
SNX27Q96L92 MPI-205ENST00000562606 1052 ntTSL 3 BASIC19.74■□□□□ 0.75
SNX27Q96L92 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SNX27Q96L92 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SNX27Q96L92 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SNX27Q96L92 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SNX27Q96L92 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SNX27Q96L92 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SNX27Q96L92 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
SNX27Q96L92 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SNX27Q96L92 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SNX27Q96L92 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SNX27Q96L92 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SNX27Q96L92 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
SNX27Q96L92 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SNX27Q96L92 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC19.73■□□□□ 0.75
SNX27Q96L92 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SNX27Q96L92 PPIH-202ENST00000372549 327 ntTSL 3 BASIC19.73■□□□□ 0.75
SNX27Q96L92 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC19.73■□□□□ 0.75
SNX27Q96L92 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC19.73■□□□□ 0.75
SNX27Q96L92 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SNX27Q96L92 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC19.73■□□□□ 0.75
SNX27Q96L92 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC19.73■□□□□ 0.75
SNX27Q96L92 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SNX27Q96L92 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC19.73■□□□□ 0.75
SNX27Q96L92 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
SNX27Q96L92 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC19.73■□□□□ 0.75
SNX27Q96L92 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC19.73■□□□□ 0.75
SNX27Q96L92 AL592071.1-201ENST00000611956 408 ntBASIC19.73■□□□□ 0.75
SNX27Q96L92 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SNX27Q96L92 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SNX27Q96L92 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.73■□□□□ 0.75
SNX27Q96L92 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SNX27Q96L92 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SNX27Q96L92 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SNX27Q96L92 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
SNX27Q96L92 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SNX27Q96L92 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SNX27Q96L92 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SNX27Q96L92 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC19.72■□□□□ 0.75
SNX27Q96L92 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SNX27Q96L92 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SNX27Q96L92 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SNX27Q96L92 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SNX27Q96L92 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.72■□□□□ 0.75
SNX27Q96L92 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC19.72■□□□□ 0.75
SNX27Q96L92 RN7SL606P-201ENST00000472779 293 ntBASIC19.72■□□□□ 0.75
SNX27Q96L92 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SNX27Q96L92 IL11-204ENST00000590625 1028 ntTSL 2 BASIC19.72■□□□□ 0.75
SNX27Q96L92 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SNX27Q96L92 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC19.72■□□□□ 0.75
SNX27Q96L92 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC19.72■□□□□ 0.75
SNX27Q96L92 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SNX27Q96L92 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms