Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC19.04■□□□□ 0.64
ATG4AQ8WYN0 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
ATG4AQ8WYN0 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
ATG4AQ8WYN0 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC19.04■□□□□ 0.64
ATG4AQ8WYN0 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
ATG4AQ8WYN0 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ATG4AQ8WYN0 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
ATG4AQ8WYN0 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
ATG4AQ8WYN0 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
ATG4AQ8WYN0 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ATG4AQ8WYN0 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC19.04■□□□□ 0.64
ATG4AQ8WYN0 STK4-201ENST00000372801 2038 ntTSL 2 BASIC19.03■□□□□ 0.64
ATG4AQ8WYN0 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
ATG4AQ8WYN0 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
ATG4AQ8WYN0 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ATG4AQ8WYN0 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC19.03■□□□□ 0.64
ATG4AQ8WYN0 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
ATG4AQ8WYN0 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
ATG4AQ8WYN0 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC19.03■□□□□ 0.64
ATG4AQ8WYN0 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC19.03■□□□□ 0.64
ATG4AQ8WYN0 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ATG4AQ8WYN0 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC19.03■□□□□ 0.64
ATG4AQ8WYN0 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ATG4AQ8WYN0 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ATG4AQ8WYN0 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ATG4AQ8WYN0 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ATG4AQ8WYN0 MIR3180-5-201ENST00000583743 153 ntBASIC19.03■□□□□ 0.64
ATG4AQ8WYN0 CYGB-204ENST00000589342 815 ntTSL 3 BASIC19.03■□□□□ 0.64
ATG4AQ8WYN0 AL049637.2-201ENST00000641778 930 ntBASIC19.03■□□□□ 0.64
ATG4AQ8WYN0 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ATG4AQ8WYN0 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
ATG4AQ8WYN0 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC19.03■□□□□ 0.64
ATG4AQ8WYN0 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ATG4AQ8WYN0 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ATG4AQ8WYN0 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC19.03■□□□□ 0.64
ATG4AQ8WYN0 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.03■□□□□ 0.64
ATG4AQ8WYN0 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC19.03■□□□□ 0.64
ATG4AQ8WYN0 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
ATG4AQ8WYN0 SDHAP2-201ENST00000455183 2001 ntBASIC19.03■□□□□ 0.64
ATG4AQ8WYN0 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC19.03■□□□□ 0.64
ATG4AQ8WYN0 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC19.03■□□□□ 0.64
ATG4AQ8WYN0 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ATG4AQ8WYN0 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ATG4AQ8WYN0 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ATG4AQ8WYN0 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
ATG4AQ8WYN0 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
ATG4AQ8WYN0 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
ATG4AQ8WYN0 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC19.02■□□□□ 0.64
ATG4AQ8WYN0 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC19.02■□□□□ 0.64
ATG4AQ8WYN0 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
ATG4AQ8WYN0 HTR7P1-202ENST00000624664 4411 ntBASIC19.02■□□□□ 0.64
ATG4AQ8WYN0 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
ATG4AQ8WYN0 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ATG4AQ8WYN0 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ATG4AQ8WYN0 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC19.02■□□□□ 0.64
ATG4AQ8WYN0 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
ATG4AQ8WYN0 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
ATG4AQ8WYN0 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC19.02■□□□□ 0.64
ATG4AQ8WYN0 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ATG4AQ8WYN0 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
ATG4AQ8WYN0 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC19.02■□□□□ 0.64
ATG4AQ8WYN0 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC19.02■□□□□ 0.64
ATG4AQ8WYN0 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC19.02■□□□□ 0.64
ATG4AQ8WYN0 AC233702.5-201ENST00000584107 538 ntBASIC19.02■□□□□ 0.64
ATG4AQ8WYN0 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC19.02■□□□□ 0.64
ATG4AQ8WYN0 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19.02■□□□□ 0.64
ATG4AQ8WYN0 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
ATG4AQ8WYN0 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
ATG4AQ8WYN0 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.02■□□□□ 0.63
ATG4AQ8WYN0 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
ATG4AQ8WYN0 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ATG4AQ8WYN0 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
ATG4AQ8WYN0 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
ATG4AQ8WYN0 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ATG4AQ8WYN0 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
ATG4AQ8WYN0 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
ATG4AQ8WYN0 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC19.01■□□□□ 0.63
ATG4AQ8WYN0 FLJ13224-201ENST00000313737 1514 ntBASIC19.01■□□□□ 0.63
ATG4AQ8WYN0 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC19.01■□□□□ 0.63
ATG4AQ8WYN0 FST-202ENST00000396947 2538 ntTSL 5 BASIC19.01■□□□□ 0.63
ATG4AQ8WYN0 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC19.01■□□□□ 0.63
ATG4AQ8WYN0 GNE-204ENST00000539208 2190 ntTSL 2 BASIC19.01■□□□□ 0.63
ATG4AQ8WYN0 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ATG4AQ8WYN0 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ATG4AQ8WYN0 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ATG4AQ8WYN0 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC19.01■□□□□ 0.63
ATG4AQ8WYN0 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.01■□□□□ 0.63
ATG4AQ8WYN0 AC012618.2-201ENST00000428058 849 ntBASIC19.01■□□□□ 0.63
ATG4AQ8WYN0 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC19.01■□□□□ 0.63
ATG4AQ8WYN0 CA15P1-201ENST00000481698 905 ntBASIC19.01■□□□□ 0.63
ATG4AQ8WYN0 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.01■□□□□ 0.63
ATG4AQ8WYN0 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC19.01■□□□□ 0.63
ATG4AQ8WYN0 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ATG4AQ8WYN0 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC19.01■□□□□ 0.63
ATG4AQ8WYN0 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
ATG4AQ8WYN0 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ATG4AQ8WYN0 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC19.01■□□□□ 0.63
ATG4AQ8WYN0 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ATG4AQ8WYN0 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ATG4AQ8WYN0 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms