Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
CKAP2Q8WWK9 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC18.24■□□□□ 0.51
CKAP2Q8WWK9 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CKAP2Q8WWK9 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CKAP2Q8WWK9 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CKAP2Q8WWK9 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CKAP2Q8WWK9 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC18.23■□□□□ 0.51
CKAP2Q8WWK9 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC18.23■□□□□ 0.51
CKAP2Q8WWK9 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CKAP2Q8WWK9 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CKAP2Q8WWK9 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CKAP2Q8WWK9 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC18.23■□□□□ 0.51
CKAP2Q8WWK9 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
CKAP2Q8WWK9 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC18.23■□□□□ 0.51
CKAP2Q8WWK9 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CKAP2Q8WWK9 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
CKAP2Q8WWK9 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CKAP2Q8WWK9 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
CKAP2Q8WWK9 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC18.23■□□□□ 0.51
CKAP2Q8WWK9 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC18.23■□□□□ 0.51
CKAP2Q8WWK9 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC18.23■□□□□ 0.51
CKAP2Q8WWK9 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC18.23■□□□□ 0.51
CKAP2Q8WWK9 DLX3-202ENST00000512495 834 ntTSL 2 BASIC18.23■□□□□ 0.51
CKAP2Q8WWK9 PRSS44-201ENST00000515154 1146 ntBASIC18.23■□□□□ 0.51
CKAP2Q8WWK9 KLF2-202ENST00000592003 564 ntTSL 3 BASIC18.23■□□□□ 0.51
CKAP2Q8WWK9 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC18.23■□□□□ 0.51
CKAP2Q8WWK9 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC18.23■□□□□ 0.51
CKAP2Q8WWK9 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CKAP2Q8WWK9 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CKAP2Q8WWK9 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CKAP2Q8WWK9 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CKAP2Q8WWK9 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC18.23■□□□□ 0.51
CKAP2Q8WWK9 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CKAP2Q8WWK9 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CKAP2Q8WWK9 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CKAP2Q8WWK9 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC18.22■□□□□ 0.51
CKAP2Q8WWK9 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CKAP2Q8WWK9 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CKAP2Q8WWK9 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CKAP2Q8WWK9 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CKAP2Q8WWK9 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
CKAP2Q8WWK9 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC18.22■□□□□ 0.51
CKAP2Q8WWK9 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC18.22■□□□□ 0.51
CKAP2Q8WWK9 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.22■□□□□ 0.51
CKAP2Q8WWK9 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.22■□□□□ 0.51
CKAP2Q8WWK9 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.22■□□□□ 0.51
CKAP2Q8WWK9 F2R-202ENST00000505600 442 ntTSL 2 BASIC18.22■□□□□ 0.51
CKAP2Q8WWK9 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC18.22■□□□□ 0.51
CKAP2Q8WWK9 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC18.22■□□□□ 0.51
CKAP2Q8WWK9 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC18.22■□□□□ 0.51
CKAP2Q8WWK9 AC092118.2-201ENST00000613495 667 ntBASIC18.22■□□□□ 0.51
CKAP2Q8WWK9 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CKAP2Q8WWK9 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
CKAP2Q8WWK9 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CKAP2Q8WWK9 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
CKAP2Q8WWK9 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
CKAP2Q8WWK9 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CKAP2Q8WWK9 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CKAP2Q8WWK9 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC18.22■□□□□ 0.51
CKAP2Q8WWK9 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CKAP2Q8WWK9 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CKAP2Q8WWK9 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CKAP2Q8WWK9 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC18.22■□□□□ 0.51
CKAP2Q8WWK9 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CKAP2Q8WWK9 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CKAP2Q8WWK9 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CKAP2Q8WWK9 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
CKAP2Q8WWK9 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CKAP2Q8WWK9 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.21■□□□□ 0.51
CKAP2Q8WWK9 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CKAP2Q8WWK9 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
CKAP2Q8WWK9 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CKAP2Q8WWK9 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CKAP2Q8WWK9 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CKAP2Q8WWK9 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CKAP2Q8WWK9 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
CKAP2Q8WWK9 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CKAP2Q8WWK9 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CKAP2Q8WWK9 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.21■□□□□ 0.51
CKAP2Q8WWK9 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CKAP2Q8WWK9 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC18.21■□□□□ 0.51
CKAP2Q8WWK9 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CKAP2Q8WWK9 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
CKAP2Q8WWK9 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CKAP2Q8WWK9 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.21■□□□□ 0.51
CKAP2Q8WWK9 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18.21■□□□□ 0.51
CKAP2Q8WWK9 BET1L-207ENST00000529614 560 ntTSL 5 BASIC18.21■□□□□ 0.51
CKAP2Q8WWK9 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CKAP2Q8WWK9 Six3os1_6.1-201ENST00000620790 196 ntBASIC18.21■□□□□ 0.51
CKAP2Q8WWK9 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
CKAP2Q8WWK9 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CKAP2Q8WWK9 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC18.21■□□□□ 0.51
CKAP2Q8WWK9 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
CKAP2Q8WWK9 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC18.21■□□□□ 0.51
CKAP2Q8WWK9 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CKAP2Q8WWK9 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CKAP2Q8WWK9 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CKAP2Q8WWK9 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC18.21■□□□□ 0.51
CKAP2Q8WWK9 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
CKAP2Q8WWK9 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC18.21■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms