Protein–RNA interactions for Protein: Q8NB14

USP38, Ubiquitin carboxyl-terminal hydrolase 38, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP38Q8NB14 MIR564-202ENST00000385049 94 ntBASIC20.46■□□□□ 0.87
USP38Q8NB14 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC20.46■□□□□ 0.87
USP38Q8NB14 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC20.46■□□□□ 0.87
USP38Q8NB14 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC20.46■□□□□ 0.87
USP38Q8NB14 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
USP38Q8NB14 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC20.46■□□□□ 0.87
USP38Q8NB14 MPI-205ENST00000562606 1052 ntTSL 3 BASIC20.46■□□□□ 0.87
USP38Q8NB14 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
USP38Q8NB14 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
USP38Q8NB14 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
USP38Q8NB14 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
USP38Q8NB14 AC008556.1-201ENST00000610908 2040 ntBASIC20.46■□□□□ 0.87
USP38Q8NB14 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
USP38Q8NB14 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
USP38Q8NB14 AC006333.2-201ENST00000607957 2099 ntBASIC20.46■□□□□ 0.87
USP38Q8NB14 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
USP38Q8NB14 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
USP38Q8NB14 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
USP38Q8NB14 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC20.45■□□□□ 0.86
USP38Q8NB14 KRT8P32-201ENST00000512863 1461 ntBASIC20.45■□□□□ 0.86
USP38Q8NB14 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC20.45■□□□□ 0.86
USP38Q8NB14 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC20.45■□□□□ 0.86
USP38Q8NB14 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
USP38Q8NB14 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
USP38Q8NB14 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
USP38Q8NB14 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
USP38Q8NB14 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
USP38Q8NB14 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC20.45■□□□□ 0.86
USP38Q8NB14 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC20.45■□□□□ 0.86
USP38Q8NB14 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
USP38Q8NB14 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
USP38Q8NB14 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC20.45■□□□□ 0.86
USP38Q8NB14 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC20.45■□□□□ 0.86
USP38Q8NB14 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
USP38Q8NB14 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
USP38Q8NB14 MIR3180-4-201ENST00000582223 153 ntBASIC20.45■□□□□ 0.86
USP38Q8NB14 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC20.45■□□□□ 0.86
USP38Q8NB14 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
USP38Q8NB14 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
USP38Q8NB14 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
USP38Q8NB14 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
USP38Q8NB14 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC20.45■□□□□ 0.86
USP38Q8NB14 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
USP38Q8NB14 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
USP38Q8NB14 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC20.45■□□□□ 0.86
USP38Q8NB14 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
USP38Q8NB14 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
USP38Q8NB14 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
USP38Q8NB14 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
USP38Q8NB14 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
USP38Q8NB14 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
USP38Q8NB14 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC20.44■□□□□ 0.86
USP38Q8NB14 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
USP38Q8NB14 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
USP38Q8NB14 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
USP38Q8NB14 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
USP38Q8NB14 CHCHD2P8-201ENST00000429873 447 ntBASIC20.44■□□□□ 0.86
USP38Q8NB14 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
USP38Q8NB14 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC20.44■□□□□ 0.86
USP38Q8NB14 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC20.44■□□□□ 0.86
USP38Q8NB14 PNN-202ENST00000553331 656 ntTSL 3 BASIC20.44■□□□□ 0.86
USP38Q8NB14 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC20.44■□□□□ 0.86
USP38Q8NB14 IL11-204ENST00000590625 1028 ntTSL 2 BASIC20.44■□□□□ 0.86
USP38Q8NB14 AC010240.3-201ENST00000607688 395 ntBASIC20.44■□□□□ 0.86
USP38Q8NB14 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
USP38Q8NB14 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
USP38Q8NB14 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
USP38Q8NB14 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
USP38Q8NB14 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC20.44■□□□□ 0.86
USP38Q8NB14 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC20.44■□□□□ 0.86
USP38Q8NB14 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
USP38Q8NB14 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
USP38Q8NB14 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
USP38Q8NB14 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
USP38Q8NB14 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
USP38Q8NB14 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
USP38Q8NB14 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
USP38Q8NB14 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
USP38Q8NB14 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC20.44■□□□□ 0.86
USP38Q8NB14 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
USP38Q8NB14 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
USP38Q8NB14 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
USP38Q8NB14 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
USP38Q8NB14 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
USP38Q8NB14 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC20.43■□□□□ 0.86
USP38Q8NB14 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
USP38Q8NB14 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
USP38Q8NB14 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
USP38Q8NB14 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
USP38Q8NB14 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
USP38Q8NB14 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
USP38Q8NB14 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
USP38Q8NB14 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
USP38Q8NB14 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC20.43■□□□□ 0.86
USP38Q8NB14 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
USP38Q8NB14 FOSL1P1-201ENST00000511041 816 ntBASIC20.43■□□□□ 0.86
USP38Q8NB14 PENK-208ENST00000523051 772 ntTSL 5 BASIC20.43■□□□□ 0.86
USP38Q8NB14 BMF-207ENST00000559701 630 ntTSL 3 BASIC20.43■□□□□ 0.86
USP38Q8NB14 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC20.43■□□□□ 0.86
USP38Q8NB14 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms