Protein–RNA interactions for Protein: Q7L7L0

HIST3H2A, Histone H2A type 3, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H2AQ7L7L0 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HIST3H2AQ7L7L0 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HIST3H2AQ7L7L0 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HIST3H2AQ7L7L0 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HIST3H2AQ7L7L0 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
HIST3H2AQ7L7L0 AP000593.1-201ENST00000393668 712 ntBASIC16.76■□□□□ 0.27
HIST3H2AQ7L7L0 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HIST3H2AQ7L7L0 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HIST3H2AQ7L7L0 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC16.76■□□□□ 0.27
HIST3H2AQ7L7L0 AP005242.2-201ENST00000580065 1175 ntBASIC16.76■□□□□ 0.27
HIST3H2AQ7L7L0 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC16.76■□□□□ 0.27
HIST3H2AQ7L7L0 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC16.76■□□□□ 0.27
HIST3H2AQ7L7L0 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC16.76■□□□□ 0.27
HIST3H2AQ7L7L0 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HIST3H2AQ7L7L0 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HIST3H2AQ7L7L0 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
HIST3H2AQ7L7L0 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HIST3H2AQ7L7L0 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
HIST3H2AQ7L7L0 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC16.76■□□□□ 0.27
HIST3H2AQ7L7L0 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HIST3H2AQ7L7L0 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC16.76■□□□□ 0.27
HIST3H2AQ7L7L0 AL162741.1-201ENST00000565563 1558 ntBASIC16.76■□□□□ 0.27
HIST3H2AQ7L7L0 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC16.76■□□□□ 0.27
HIST3H2AQ7L7L0 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HIST3H2AQ7L7L0 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
HIST3H2AQ7L7L0 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC16.76■□□□□ 0.27
HIST3H2AQ7L7L0 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HIST3H2AQ7L7L0 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
HIST3H2AQ7L7L0 PCDHB18P-201ENST00000524813 2368 ntBASIC16.75■□□□□ 0.27
HIST3H2AQ7L7L0 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
HIST3H2AQ7L7L0 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.75■□□□□ 0.27
HIST3H2AQ7L7L0 GPAT2P1-201ENST00000444924 1672 ntBASIC16.75■□□□□ 0.27
HIST3H2AQ7L7L0 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC16.75■□□□□ 0.27
HIST3H2AQ7L7L0 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
HIST3H2AQ7L7L0 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC16.75■□□□□ 0.27
HIST3H2AQ7L7L0 KRT17P2-201ENST00000300992 1314 ntBASIC16.75■□□□□ 0.27
HIST3H2AQ7L7L0 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HIST3H2AQ7L7L0 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
HIST3H2AQ7L7L0 AC034236.2-201ENST00000606662 1610 ntBASIC16.75■□□□□ 0.27
HIST3H2AQ7L7L0 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HIST3H2AQ7L7L0 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.75■□□□□ 0.27
HIST3H2AQ7L7L0 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC16.75■□□□□ 0.27
HIST3H2AQ7L7L0 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC16.75■□□□□ 0.27
HIST3H2AQ7L7L0 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC16.75■□□□□ 0.27
HIST3H2AQ7L7L0 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HIST3H2AQ7L7L0 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC16.75■□□□□ 0.27
HIST3H2AQ7L7L0 DHDH-203ENST00000522614 776 ntTSL 5 BASIC16.75■□□□□ 0.27
HIST3H2AQ7L7L0 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC16.75■□□□□ 0.27
HIST3H2AQ7L7L0 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC16.75■□□□□ 0.27
HIST3H2AQ7L7L0 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HIST3H2AQ7L7L0 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
HIST3H2AQ7L7L0 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
HIST3H2AQ7L7L0 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC16.75■□□□□ 0.27
HIST3H2AQ7L7L0 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
HIST3H2AQ7L7L0 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC16.75■□□□□ 0.27
HIST3H2AQ7L7L0 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HIST3H2AQ7L7L0 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HIST3H2AQ7L7L0 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC16.75■□□□□ 0.27
HIST3H2AQ7L7L0 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
HIST3H2AQ7L7L0 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HIST3H2AQ7L7L0 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HIST3H2AQ7L7L0 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC16.75■□□□□ 0.27
HIST3H2AQ7L7L0 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
HIST3H2AQ7L7L0 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HIST3H2AQ7L7L0 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HIST3H2AQ7L7L0 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
HIST3H2AQ7L7L0 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
HIST3H2AQ7L7L0 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
HIST3H2AQ7L7L0 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
HIST3H2AQ7L7L0 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
HIST3H2AQ7L7L0 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
HIST3H2AQ7L7L0 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HIST3H2AQ7L7L0 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
HIST3H2AQ7L7L0 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HIST3H2AQ7L7L0 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC16.74■□□□□ 0.27
HIST3H2AQ7L7L0 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.74■□□□□ 0.27
HIST3H2AQ7L7L0 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HIST3H2AQ7L7L0 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.74■□□□□ 0.27
HIST3H2AQ7L7L0 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HIST3H2AQ7L7L0 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
HIST3H2AQ7L7L0 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC16.74■□□□□ 0.27
HIST3H2AQ7L7L0 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HIST3H2AQ7L7L0 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HIST3H2AQ7L7L0 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC16.74■□□□□ 0.27
HIST3H2AQ7L7L0 CCR12P-201ENST00000446203 998 ntBASIC16.74■□□□□ 0.27
HIST3H2AQ7L7L0 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC16.74■□□□□ 0.27
HIST3H2AQ7L7L0 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HIST3H2AQ7L7L0 KRT18P41-201ENST00000518924 1277 ntBASIC16.74■□□□□ 0.27
HIST3H2AQ7L7L0 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC16.74■□□□□ 0.27
HIST3H2AQ7L7L0 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC16.74■□□□□ 0.27
HIST3H2AQ7L7L0 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HIST3H2AQ7L7L0 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HIST3H2AQ7L7L0 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HIST3H2AQ7L7L0 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HIST3H2AQ7L7L0 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
HIST3H2AQ7L7L0 MADD-208ENST00000405573 1823 ntTSL 5 BASIC16.74■□□□□ 0.27
HIST3H2AQ7L7L0 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HIST3H2AQ7L7L0 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HIST3H2AQ7L7L0 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HIST3H2AQ7L7L0 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms