Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
H3F3CQ6NXT2 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
H3F3CQ6NXT2 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
H3F3CQ6NXT2 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
H3F3CQ6NXT2 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
H3F3CQ6NXT2 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
H3F3CQ6NXT2 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
H3F3CQ6NXT2 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC16.95■□□□□ 0.3
H3F3CQ6NXT2 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
H3F3CQ6NXT2 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
H3F3CQ6NXT2 AL450487.1-201ENST00000426799 995 ntBASIC16.95■□□□□ 0.3
H3F3CQ6NXT2 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC16.95■□□□□ 0.3
H3F3CQ6NXT2 PPOX-214ENST00000535223 664 ntTSL 3 BASIC16.95■□□□□ 0.3
H3F3CQ6NXT2 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC16.95■□□□□ 0.3
H3F3CQ6NXT2 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
H3F3CQ6NXT2 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
H3F3CQ6NXT2 MIR3652-201ENST00000579335 131 ntBASIC16.95■□□□□ 0.3
H3F3CQ6NXT2 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
H3F3CQ6NXT2 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
H3F3CQ6NXT2 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC16.95■□□□□ 0.3
H3F3CQ6NXT2 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.95■□□□□ 0.3
H3F3CQ6NXT2 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
H3F3CQ6NXT2 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC16.95■□□□□ 0.3
H3F3CQ6NXT2 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC16.95■□□□□ 0.3
H3F3CQ6NXT2 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
H3F3CQ6NXT2 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
H3F3CQ6NXT2 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
H3F3CQ6NXT2 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
H3F3CQ6NXT2 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
H3F3CQ6NXT2 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
H3F3CQ6NXT2 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC16.94■□□□□ 0.3
H3F3CQ6NXT2 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
H3F3CQ6NXT2 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC16.94■□□□□ 0.3
H3F3CQ6NXT2 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC16.94■□□□□ 0.3
H3F3CQ6NXT2 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
H3F3CQ6NXT2 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC16.94■□□□□ 0.3
H3F3CQ6NXT2 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
H3F3CQ6NXT2 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
H3F3CQ6NXT2 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
H3F3CQ6NXT2 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
H3F3CQ6NXT2 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
H3F3CQ6NXT2 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
H3F3CQ6NXT2 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
H3F3CQ6NXT2 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
H3F3CQ6NXT2 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
H3F3CQ6NXT2 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC16.94■□□□□ 0.3
H3F3CQ6NXT2 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC16.94■□□□□ 0.3
H3F3CQ6NXT2 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC16.94■□□□□ 0.3
H3F3CQ6NXT2 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC16.94■□□□□ 0.3
H3F3CQ6NXT2 TPSP2-201ENST00000561760 610 ntBASIC16.94■□□□□ 0.3
H3F3CQ6NXT2 IL11-204ENST00000590625 1028 ntTSL 2 BASIC16.94■□□□□ 0.3
H3F3CQ6NXT2 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
H3F3CQ6NXT2 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC16.94■□□□□ 0.3
H3F3CQ6NXT2 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
H3F3CQ6NXT2 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC16.94■□□□□ 0.3
H3F3CQ6NXT2 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
H3F3CQ6NXT2 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
H3F3CQ6NXT2 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
H3F3CQ6NXT2 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
H3F3CQ6NXT2 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
H3F3CQ6NXT2 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC16.94■□□□□ 0.3
H3F3CQ6NXT2 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
H3F3CQ6NXT2 KRT18P1-202ENST00000452408 1331 ntBASIC16.94■□□□□ 0.3
H3F3CQ6NXT2 UBC-206ENST00000538617 1303 ntTSL 5 BASIC16.94■□□□□ 0.3
H3F3CQ6NXT2 MYLKP1-201ENST00000509077 1580 ntBASIC16.94■□□□□ 0.3
H3F3CQ6NXT2 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
H3F3CQ6NXT2 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC16.93■□□□□ 0.3
H3F3CQ6NXT2 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
H3F3CQ6NXT2 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
H3F3CQ6NXT2 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
H3F3CQ6NXT2 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
H3F3CQ6NXT2 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
H3F3CQ6NXT2 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
H3F3CQ6NXT2 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
H3F3CQ6NXT2 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
H3F3CQ6NXT2 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
H3F3CQ6NXT2 HES2-202ENST00000377836 507 ntTSL 2 BASIC16.93■□□□□ 0.3
H3F3CQ6NXT2 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC16.93■□□□□ 0.3
H3F3CQ6NXT2 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
H3F3CQ6NXT2 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC16.93■□□□□ 0.3
H3F3CQ6NXT2 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC16.93■□□□□ 0.3
H3F3CQ6NXT2 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
H3F3CQ6NXT2 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
H3F3CQ6NXT2 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
H3F3CQ6NXT2 COBL-210ENST00000632460 1941 ntTSL 5 BASIC16.93■□□□□ 0.3
H3F3CQ6NXT2 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
H3F3CQ6NXT2 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
H3F3CQ6NXT2 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC16.93■□□□□ 0.3
H3F3CQ6NXT2 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
H3F3CQ6NXT2 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
H3F3CQ6NXT2 AC004408.2-201ENST00000623613 2777 ntBASIC16.93■□□□□ 0.3
H3F3CQ6NXT2 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC16.93■□□□□ 0.3
H3F3CQ6NXT2 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
H3F3CQ6NXT2 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
H3F3CQ6NXT2 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
H3F3CQ6NXT2 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
H3F3CQ6NXT2 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
H3F3CQ6NXT2 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
H3F3CQ6NXT2 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
H3F3CQ6NXT2 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms