Protein–RNA interactions for Protein: Q5VV42

CDKAL1, Threonylcarbamoyladenosine tRNA methylthiotransferase, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1Q5VV42 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CDKAL1Q5VV42 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC20.08■□□□□ 0.81
CDKAL1Q5VV42 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC20.08■□□□□ 0.81
CDKAL1Q5VV42 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC20.08■□□□□ 0.81
CDKAL1Q5VV42 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CDKAL1Q5VV42 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CDKAL1Q5VV42 AL024508.2-201ENST00000607749 1894 ntBASIC20.08■□□□□ 0.81
CDKAL1Q5VV42 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
CDKAL1Q5VV42 ILF2-202ENST00000368681 726 ntTSL 2 BASIC20.08■□□□□ 0.81
CDKAL1Q5VV42 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CDKAL1Q5VV42 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CDKAL1Q5VV42 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC20.08■□□□□ 0.81
CDKAL1Q5VV42 UBE2SP1-201ENST00000450587 669 ntBASIC20.08■□□□□ 0.81
CDKAL1Q5VV42 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CDKAL1Q5VV42 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC20.08■□□□□ 0.81
CDKAL1Q5VV42 GRAMD4P8-201ENST00000605465 1115 ntBASIC20.08■□□□□ 0.81
CDKAL1Q5VV42 DECR2-212ENST00000627716 352 ntTSL 2 BASIC20.08■□□□□ 0.81
CDKAL1Q5VV42 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CDKAL1Q5VV42 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CDKAL1Q5VV42 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
CDKAL1Q5VV42 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CDKAL1Q5VV42 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CDKAL1Q5VV42 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CDKAL1Q5VV42 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CDKAL1Q5VV42 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
CDKAL1Q5VV42 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CDKAL1Q5VV42 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
CDKAL1Q5VV42 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDKAL1Q5VV42 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDKAL1Q5VV42 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
CDKAL1Q5VV42 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDKAL1Q5VV42 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC20.07■□□□□ 0.8
CDKAL1Q5VV42 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC20.07■□□□□ 0.8
CDKAL1Q5VV42 AL353719.1-201ENST00000566847 864 ntBASIC20.07■□□□□ 0.8
CDKAL1Q5VV42 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC20.07■□□□□ 0.8
CDKAL1Q5VV42 AP001412.1-201ENST00000608405 714 ntBASIC20.07■□□□□ 0.8
CDKAL1Q5VV42 AC026471.5-201ENST00000615068 467 ntBASIC20.07■□□□□ 0.8
CDKAL1Q5VV42 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC20.07■□□□□ 0.8
CDKAL1Q5VV42 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDKAL1Q5VV42 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDKAL1Q5VV42 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
CDKAL1Q5VV42 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDKAL1Q5VV42 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDKAL1Q5VV42 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC20.07■□□□□ 0.8
CDKAL1Q5VV42 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDKAL1Q5VV42 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDKAL1Q5VV42 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CDKAL1Q5VV42 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDKAL1Q5VV42 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CDKAL1Q5VV42 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CDKAL1Q5VV42 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDKAL1Q5VV42 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC20.06■□□□□ 0.8
CDKAL1Q5VV42 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
CDKAL1Q5VV42 PP12613-201ENST00000424958 2230 ntBASIC20.06■□□□□ 0.8
CDKAL1Q5VV42 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDKAL1Q5VV42 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDKAL1Q5VV42 SLC25A1P2-201ENST00000430693 912 ntBASIC20.06■□□□□ 0.8
CDKAL1Q5VV42 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CDKAL1Q5VV42 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC20.06■□□□□ 0.8
CDKAL1Q5VV42 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDKAL1Q5VV42 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC20.06■□□□□ 0.8
CDKAL1Q5VV42 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
CDKAL1Q5VV42 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDKAL1Q5VV42 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDKAL1Q5VV42 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
CDKAL1Q5VV42 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDKAL1Q5VV42 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CDKAL1Q5VV42 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC20.06■□□□□ 0.8
CDKAL1Q5VV42 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDKAL1Q5VV42 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
CDKAL1Q5VV42 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CDKAL1Q5VV42 PODN-203ENST00000395871 2744 ntTSL 5 BASIC20.05■□□□□ 0.8
CDKAL1Q5VV42 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDKAL1Q5VV42 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC20.05■□□□□ 0.8
CDKAL1Q5VV42 AC092338.2-201ENST00000568827 1415 ntBASIC20.05■□□□□ 0.8
CDKAL1Q5VV42 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
CDKAL1Q5VV42 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDKAL1Q5VV42 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDKAL1Q5VV42 AL355355.2-201ENST00000442321 338 ntBASIC20.05■□□□□ 0.8
CDKAL1Q5VV42 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CDKAL1Q5VV42 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
CDKAL1Q5VV42 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CDKAL1Q5VV42 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC20.05■□□□□ 0.8
CDKAL1Q5VV42 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
CDKAL1Q5VV42 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDKAL1Q5VV42 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CDKAL1Q5VV42 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CDKAL1Q5VV42 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
CDKAL1Q5VV42 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDKAL1Q5VV42 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDKAL1Q5VV42 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CDKAL1Q5VV42 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
CDKAL1Q5VV42 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDKAL1Q5VV42 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDKAL1Q5VV42 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC20.04■□□□□ 0.8
CDKAL1Q5VV42 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC20.04■□□□□ 0.8
CDKAL1Q5VV42 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC20.04■□□□□ 0.8
CDKAL1Q5VV42 AL158047.1-201ENST00000445918 881 ntBASIC20.04■□□□□ 0.8
CDKAL1Q5VV42 TSPY17P-201ENST00000450329 467 ntBASIC20.04■□□□□ 0.8
CDKAL1Q5VV42 AC104390.1-201ENST00000555663 520 ntBASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms