Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CBX1P83916 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC19.23■□□□□ 0.67
CBX1P83916 HES6-206ENST00000409574 738 ntTSL 2 BASIC19.23■□□□□ 0.67
CBX1P83916 AC007322.3-201ENST00000426526 701 ntBASIC19.23■□□□□ 0.67
CBX1P83916 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
CBX1P83916 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.23■□□□□ 0.67
CBX1P83916 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.23■□□□□ 0.67
CBX1P83916 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.23■□□□□ 0.67
CBX1P83916 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC19.23■□□□□ 0.67
CBX1P83916 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC19.23■□□□□ 0.67
CBX1P83916 AL356652.1-201ENST00000615962 565 ntBASIC19.23■□□□□ 0.67
CBX1P83916 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC19.23■□□□□ 0.67
CBX1P83916 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CBX1P83916 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
CBX1P83916 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CBX1P83916 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CBX1P83916 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CBX1P83916 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CBX1P83916 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CBX1P83916 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CBX1P83916 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CBX1P83916 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CBX1P83916 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC19.22■□□□□ 0.67
CBX1P83916 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CBX1P83916 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
CBX1P83916 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC19.22■□□□□ 0.67
CBX1P83916 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.22■□□□□ 0.67
CBX1P83916 STK24-203ENST00000397517 4578 ntTSL 2 BASIC19.22■□□□□ 0.67
CBX1P83916 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CBX1P83916 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CBX1P83916 PTCHD3P2-201ENST00000424937 1205 ntBASIC19.22■□□□□ 0.67
CBX1P83916 SRD5A1P1-201ENST00000442297 786 ntBASIC19.22■□□□□ 0.67
CBX1P83916 CREM-229ENST00000474362 1030 ntTSL 2 BASIC19.22■□□□□ 0.67
CBX1P83916 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.22■□□□□ 0.67
CBX1P83916 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CBX1P83916 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC19.22■□□□□ 0.67
CBX1P83916 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CBX1P83916 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
CBX1P83916 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
CBX1P83916 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC19.22■□□□□ 0.67
CBX1P83916 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CBX1P83916 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CBX1P83916 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CBX1P83916 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CBX1P83916 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CBX1P83916 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CBX1P83916 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC19.22■□□□□ 0.67
CBX1P83916 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CBX1P83916 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
CBX1P83916 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CBX1P83916 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CBX1P83916 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CBX1P83916 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC19.21■□□□□ 0.67
CBX1P83916 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CBX1P83916 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CBX1P83916 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CBX1P83916 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC19.21■□□□□ 0.67
CBX1P83916 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CBX1P83916 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.21■□□□□ 0.67
CBX1P83916 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CBX1P83916 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC19.21■□□□□ 0.67
CBX1P83916 AL356740.2-201ENST00000601559 647 ntBASIC19.21■□□□□ 0.67
CBX1P83916 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.21■□□□□ 0.67
CBX1P83916 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CBX1P83916 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CBX1P83916 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CBX1P83916 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CBX1P83916 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CBX1P83916 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CBX1P83916 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CBX1P83916 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.21■□□□□ 0.67
CBX1P83916 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CBX1P83916 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CBX1P83916 HLA-DQB1-201ENST00000374943 1656 ntBASIC19.2■□□□□ 0.66
CBX1P83916 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CBX1P83916 AL603756.1-201ENST00000606511 2163 ntBASIC19.2■□□□□ 0.66
CBX1P83916 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CBX1P83916 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CBX1P83916 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CBX1P83916 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CBX1P83916 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CBX1P83916 CASK-202ENST00000378158 3848 ntTSL 5 BASIC19.2■□□□□ 0.66
CBX1P83916 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CBX1P83916 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CBX1P83916 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CBX1P83916 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC19.2■□□□□ 0.66
CBX1P83916 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
CBX1P83916 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CBX1P83916 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CBX1P83916 AC105917.1-201ENST00000506637 2539 ntBASIC19.2■□□□□ 0.66
CBX1P83916 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CBX1P83916 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CBX1P83916 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC19.2■□□□□ 0.66
CBX1P83916 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CBX1P83916 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CBX1P83916 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CBX1P83916 BID-213ENST00000615414 2236 ntTSL 5 BASIC19.2■□□□□ 0.66
CBX1P83916 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CBX1P83916 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC19.2■□□□□ 0.66
CBX1P83916 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms