Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
RPL39P62891 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
RPL39P62891 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC12.99□□□□□ -0.33
RPL39P62891 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC12.99□□□□□ -0.33
RPL39P62891 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
RPL39P62891 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
RPL39P62891 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RPL39P62891 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RPL39P62891 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
RPL39P62891 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RPL39P62891 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RPL39P62891 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RPL39P62891 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
RPL39P62891 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RPL39P62891 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
RPL39P62891 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC12.99□□□□□ -0.33
RPL39P62891 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC12.99□□□□□ -0.33
RPL39P62891 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC12.99□□□□□ -0.33
RPL39P62891 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
RPL39P62891 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC12.99□□□□□ -0.33
RPL39P62891 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC12.99□□□□□ -0.33
RPL39P62891 AC092118.2-201ENST00000613495 667 ntBASIC12.99□□□□□ -0.33
RPL39P62891 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
RPL39P62891 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
RPL39P62891 AC141586.5-201ENST00000624546 2050 ntBASIC12.99□□□□□ -0.33
RPL39P62891 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC12.99□□□□□ -0.33
RPL39P62891 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
RPL39P62891 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC12.99□□□□□ -0.33
RPL39P62891 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC12.99□□□□□ -0.33
RPL39P62891 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC12.99□□□□□ -0.33
RPL39P62891 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
RPL39P62891 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
RPL39P62891 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
RPL39P62891 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC12.99□□□□□ -0.33
RPL39P62891 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
RPL39P62891 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
RPL39P62891 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RPL39P62891 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
RPL39P62891 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC12.98□□□□□ -0.33
RPL39P62891 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RPL39P62891 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC12.98□□□□□ -0.33
RPL39P62891 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
RPL39P62891 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RPL39P62891 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
RPL39P62891 AL096828.2-201ENST00000567259 1965 ntBASIC12.98□□□□□ -0.33
RPL39P62891 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
RPL39P62891 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
RPL39P62891 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC12.98□□□□□ -0.33
RPL39P62891 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC12.98□□□□□ -0.33
RPL39P62891 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC12.98□□□□□ -0.33
RPL39P62891 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC12.98□□□□□ -0.33
RPL39P62891 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RPL39P62891 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
RPL39P62891 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
RPL39P62891 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
RPL39P62891 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RPL39P62891 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RPL39P62891 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC12.98□□□□□ -0.33
RPL39P62891 METTL15-202ENST00000403099 795 ntTSL 5 BASIC12.98□□□□□ -0.33
RPL39P62891 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC12.98□□□□□ -0.33
RPL39P62891 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC12.98□□□□□ -0.33
RPL39P62891 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
RPL39P62891 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RPL39P62891 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
RPL39P62891 C1QL1P1-201ENST00000568105 661 ntBASIC12.98□□□□□ -0.33
RPL39P62891 SOX15-203ENST00000570788 1093 ntBASIC12.98□□□□□ -0.33
RPL39P62891 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC12.98□□□□□ -0.33
RPL39P62891 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC12.98□□□□□ -0.33
RPL39P62891 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC12.98□□□□□ -0.33
RPL39P62891 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC12.98□□□□□ -0.33
RPL39P62891 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RPL39P62891 AC073111.5-205ENST00000641717 521 ntBASIC12.98□□□□□ -0.33
RPL39P62891 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
RPL39P62891 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
RPL39P62891 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
RPL39P62891 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
RPL39P62891 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RPL39P62891 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC12.98□□□□□ -0.33
RPL39P62891 BANP-227ENST00000626016 2144 ntTSL 2 BASIC12.98□□□□□ -0.33
RPL39P62891 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
RPL39P62891 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RPL39P62891 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC12.98□□□□□ -0.33
RPL39P62891 MYLKP1-201ENST00000509077 1580 ntBASIC12.98□□□□□ -0.33
RPL39P62891 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
RPL39P62891 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RPL39P62891 AD000864.1-201ENST00000624076 2295 ntBASIC12.97□□□□□ -0.33
RPL39P62891 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RPL39P62891 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC12.97□□□□□ -0.33
RPL39P62891 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RPL39P62891 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
RPL39P62891 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
RPL39P62891 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC12.97□□□□□ -0.33
RPL39P62891 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
RPL39P62891 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RPL39P62891 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RPL39P62891 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RPL39P62891 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC12.97□□□□□ -0.33
RPL39P62891 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RPL39P62891 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
RPL39P62891 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms