Protein–RNA interactions for Protein: P55771

PAX9, Paired box protein Pax-9, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX9P55771 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
PAX9P55771 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
PAX9P55771 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PAX9P55771 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PAX9P55771 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
PAX9P55771 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC14.75□□□□□ -0.05
PAX9P55771 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PAX9P55771 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PAX9P55771 LINC00602-201ENST00000629776 2065 ntBASIC14.75□□□□□ -0.05
PAX9P55771 HTR7P1-202ENST00000624664 4411 ntBASIC14.75□□□□□ -0.05
PAX9P55771 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
PAX9P55771 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PAX9P55771 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PAX9P55771 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC14.74□□□□□ -0.05
PAX9P55771 AL109659.2-201ENST00000606809 1674 ntBASIC14.74□□□□□ -0.05
PAX9P55771 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
PAX9P55771 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
PAX9P55771 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PAX9P55771 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
PAX9P55771 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PAX9P55771 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
PAX9P55771 AC011676.5-201ENST00000624864 2660 ntBASIC14.74□□□□□ -0.05
PAX9P55771 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
PAX9P55771 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PAX9P55771 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
PAX9P55771 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PAX9P55771 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PAX9P55771 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PAX9P55771 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
PAX9P55771 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC14.74□□□□□ -0.05
PAX9P55771 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
PAX9P55771 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC14.74□□□□□ -0.05
PAX9P55771 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC14.74□□□□□ -0.05
PAX9P55771 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
PAX9P55771 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC14.74□□□□□ -0.05
PAX9P55771 GXYLT1P5-201ENST00000614548 1189 ntBASIC14.74□□□□□ -0.05
PAX9P55771 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC14.74□□□□□ -0.05
PAX9P55771 KRT18P55-202ENST00000578578 1546 ntBASIC14.74□□□□□ -0.05
PAX9P55771 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PAX9P55771 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PAX9P55771 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
PAX9P55771 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PAX9P55771 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PAX9P55771 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
PAX9P55771 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PAX9P55771 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PAX9P55771 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
PAX9P55771 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
PAX9P55771 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PAX9P55771 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC14.74□□□□□ -0.05
PAX9P55771 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
PAX9P55771 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
PAX9P55771 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
PAX9P55771 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PAX9P55771 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
PAX9P55771 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PAX9P55771 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
PAX9P55771 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PAX9P55771 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC14.73□□□□□ -0.05
PAX9P55771 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC14.73□□□□□ -0.05
PAX9P55771 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PAX9P55771 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PAX9P55771 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
PAX9P55771 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PAX9P55771 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PAX9P55771 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PAX9P55771 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PAX9P55771 SP100-208ENST00000427101 1922 ntTSL 2 BASIC14.73□□□□□ -0.05
PAX9P55771 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC14.73□□□□□ -0.05
PAX9P55771 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PAX9P55771 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PAX9P55771 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PAX9P55771 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
PAX9P55771 AP000593.1-201ENST00000393668 712 ntBASIC14.73□□□□□ -0.05
PAX9P55771 DERL1-203ENST00000419562 918 ntTSL 2 BASIC14.73□□□□□ -0.05
PAX9P55771 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC14.73□□□□□ -0.05
PAX9P55771 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC14.73□□□□□ -0.05
PAX9P55771 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC14.73□□□□□ -0.05
PAX9P55771 AL109923.1-201ENST00000618799 583 ntBASIC14.73□□□□□ -0.05
PAX9P55771 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC14.73□□□□□ -0.05
PAX9P55771 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC14.73□□□□□ -0.05
PAX9P55771 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC14.73□□□□□ -0.05
PAX9P55771 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC14.73□□□□□ -0.05
PAX9P55771 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PAX9P55771 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PAX9P55771 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PAX9P55771 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC14.73□□□□□ -0.05
PAX9P55771 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
PAX9P55771 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PAX9P55771 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
PAX9P55771 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PAX9P55771 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
PAX9P55771 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PAX9P55771 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
PAX9P55771 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PAX9P55771 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PAX9P55771 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PAX9P55771 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
PAX9P55771 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC14.72□□□□□ -0.05
PAX9P55771 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms