Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
CDH12P55289 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDH12P55289 PRORSD1P-201ENST00000295112 541 ntBASIC17.13■□□□□ 0.33
CDH12P55289 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CDH12P55289 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CDH12P55289 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC17.13■□□□□ 0.33
CDH12P55289 FAM197Y1-201ENST00000421178 764 ntBASIC17.13■□□□□ 0.33
CDH12P55289 SAPCD2P4-201ENST00000424595 1171 ntBASIC17.13■□□□□ 0.33
CDH12P55289 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC17.13■□□□□ 0.33
CDH12P55289 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CDH12P55289 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC17.13■□□□□ 0.33
CDH12P55289 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC17.13■□□□□ 0.33
CDH12P55289 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC17.13■□□□□ 0.33
CDH12P55289 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CDH12P55289 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC17.13■□□□□ 0.33
CDH12P55289 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CDH12P55289 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC17.13■□□□□ 0.33
CDH12P55289 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDH12P55289 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
CDH12P55289 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.13■□□□□ 0.33
CDH12P55289 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CDH12P55289 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CDH12P55289 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CDH12P55289 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CDH12P55289 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDH12P55289 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CDH12P55289 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.13■□□□□ 0.33
CDH12P55289 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
CDH12P55289 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDH12P55289 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CDH12P55289 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDH12P55289 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDH12P55289 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.12■□□□□ 0.33
CDH12P55289 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDH12P55289 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.12■□□□□ 0.33
CDH12P55289 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.12■□□□□ 0.33
CDH12P55289 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDH12P55289 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CDH12P55289 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.12■□□□□ 0.33
CDH12P55289 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDH12P55289 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CDH12P55289 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC17.12■□□□□ 0.33
CDH12P55289 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC17.12■□□□□ 0.33
CDH12P55289 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDH12P55289 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC17.12■□□□□ 0.33
CDH12P55289 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.12■□□□□ 0.33
CDH12P55289 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.12■□□□□ 0.33
CDH12P55289 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.12■□□□□ 0.33
CDH12P55289 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CDH12P55289 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDH12P55289 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CDH12P55289 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.11■□□□□ 0.33
CDH12P55289 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.11■□□□□ 0.33
CDH12P55289 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDH12P55289 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
CDH12P55289 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CDH12P55289 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDH12P55289 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CDH12P55289 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CDH12P55289 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.11■□□□□ 0.33
CDH12P55289 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.11■□□□□ 0.33
CDH12P55289 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDH12P55289 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.11■□□□□ 0.33
CDH12P55289 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
CDH12P55289 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDH12P55289 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
CDH12P55289 PEX7-202ENST00000367756 680 ntTSL 3 BASIC17.11■□□□□ 0.33
CDH12P55289 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDH12P55289 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDH12P55289 MESTP1-201ENST00000404287 994 ntBASIC17.11■□□□□ 0.33
CDH12P55289 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC17.11■□□□□ 0.33
CDH12P55289 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC17.11■□□□□ 0.33
CDH12P55289 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.11■□□□□ 0.33
CDH12P55289 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC17.11■□□□□ 0.33
CDH12P55289 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC17.11■□□□□ 0.33
CDH12P55289 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDH12P55289 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDH12P55289 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.11■□□□□ 0.33
CDH12P55289 FSCN1P1-201ENST00000568912 1481 ntBASIC17.11■□□□□ 0.33
CDH12P55289 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDH12P55289 MYLKP1-201ENST00000509077 1580 ntBASIC17.11■□□□□ 0.33
CDH12P55289 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDH12P55289 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.1■□□□□ 0.33
CDH12P55289 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDH12P55289 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDH12P55289 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDH12P55289 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDH12P55289 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDH12P55289 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CDH12P55289 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDH12P55289 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDH12P55289 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDH12P55289 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDH12P55289 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDH12P55289 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
CDH12P55289 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDH12P55289 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.1■□□□□ 0.33
CDH12P55289 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.1■□□□□ 0.33
CDH12P55289 AC142381.4-202ENST00000563973 229 ntBASIC17.1■□□□□ 0.33
CDH12P55289 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms