Protein–RNA interactions for Protein: P50553

ASCL1, Achaete-scute homolog 1, humanhuman

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ASCL1P50553 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
ASCL1P50553 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ASCL1P50553 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ASCL1P50553 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
ASCL1P50553 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
ASCL1P50553 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
ASCL1P50553 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.31■□□□□ 0.2
ASCL1P50553 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC16.31■□□□□ 0.2
ASCL1P50553 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC16.31■□□□□ 0.2
ASCL1P50553 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ASCL1P50553 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ASCL1P50553 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
ASCL1P50553 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC16.31■□□□□ 0.2
ASCL1P50553 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ASCL1P50553 FAAHP1-202ENST00000446499 1238 ntBASIC16.31■□□□□ 0.2
ASCL1P50553 LINC00265-3P-201ENST00000447588 903 ntBASIC16.31■□□□□ 0.2
ASCL1P50553 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC16.31■□□□□ 0.2
ASCL1P50553 CIB2-208ENST00000560618 804 ntTSL 2 BASIC16.31■□□□□ 0.2
ASCL1P50553 AC009065.1-201ENST00000564055 1225 ntBASIC16.31■□□□□ 0.2
ASCL1P50553 RNF126P1-202ENST00000569893 925 ntBASIC16.31■□□□□ 0.2
ASCL1P50553 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC16.31■□□□□ 0.2
ASCL1P50553 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC16.31■□□□□ 0.2
ASCL1P50553 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC16.31■□□□□ 0.2
ASCL1P50553 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ASCL1P50553 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
ASCL1P50553 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC16.31■□□□□ 0.2
ASCL1P50553 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ASCL1P50553 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC16.31■□□□□ 0.2
ASCL1P50553 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC16.31■□□□□ 0.2
ASCL1P50553 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ASCL1P50553 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
ASCL1P50553 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ASCL1P50553 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
ASCL1P50553 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ASCL1P50553 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
ASCL1P50553 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
ASCL1P50553 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
ASCL1P50553 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ASCL1P50553 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ASCL1P50553 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ASCL1P50553 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ASCL1P50553 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ASCL1P50553 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ASCL1P50553 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ASCL1P50553 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ASCL1P50553 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ASCL1P50553 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC16.3■□□□□ 0.2
ASCL1P50553 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.3■□□□□ 0.2
ASCL1P50553 AP003733.1-201ENST00000491725 852 ntBASIC16.3■□□□□ 0.2
ASCL1P50553 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC16.3■□□□□ 0.2
ASCL1P50553 TPSP2-201ENST00000561760 610 ntBASIC16.3■□□□□ 0.2
ASCL1P50553 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC16.3■□□□□ 0.2
ASCL1P50553 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ASCL1P50553 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC16.3■□□□□ 0.2
ASCL1P50553 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC16.3■□□□□ 0.2
ASCL1P50553 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
ASCL1P50553 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ASCL1P50553 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC16.3■□□□□ 0.2
ASCL1P50553 IRX1P1-201ENST00000438849 1838 ntBASIC16.3■□□□□ 0.2
ASCL1P50553 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ASCL1P50553 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
ASCL1P50553 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ASCL1P50553 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
ASCL1P50553 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ASCL1P50553 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
ASCL1P50553 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC16.3■□□□□ 0.2
ASCL1P50553 Z83836.1-201ENST00000624605 1642 ntBASIC16.3■□□□□ 0.2
ASCL1P50553 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ASCL1P50553 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC16.3■□□□□ 0.2
ASCL1P50553 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
ASCL1P50553 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ASCL1P50553 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
ASCL1P50553 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ASCL1P50553 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC16.29■□□□□ 0.2
ASCL1P50553 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ASCL1P50553 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ASCL1P50553 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
ASCL1P50553 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ASCL1P50553 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC16.29■□□□□ 0.2
ASCL1P50553 UBC-206ENST00000538617 1303 ntTSL 5 BASIC16.29■□□□□ 0.2
ASCL1P50553 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC16.29■□□□□ 0.2
ASCL1P50553 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC16.29■□□□□ 0.2
ASCL1P50553 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
ASCL1P50553 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ASCL1P50553 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC16.29■□□□□ 0.2
ASCL1P50553 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC16.29■□□□□ 0.2
ASCL1P50553 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
ASCL1P50553 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC16.29■□□□□ 0.2
ASCL1P50553 AP000867.3-201ENST00000524675 377 ntBASIC16.29■□□□□ 0.2
ASCL1P50553 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC16.29■□□□□ 0.2
ASCL1P50553 AC012615.1-201ENST00000565797 1299 ntBASIC16.29■□□□□ 0.2
ASCL1P50553 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC16.29■□□□□ 0.2
ASCL1P50553 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ASCL1P50553 AC090616.6-201ENST00000582640 721 ntBASIC16.29■□□□□ 0.2
ASCL1P50553 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
ASCL1P50553 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC16.29■□□□□ 0.2
ASCL1P50553 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC16.29■□□□□ 0.2
ASCL1P50553 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ASCL1P50553 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC16.29■□□□□ 0.2
ASCL1P50553 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms