Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 MDFI-202ENST00000373050 809 ntTSL 2 BASIC17.25■□□□□ 0.35
CLK1P49759 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLK1P49759 AC116562.2-201ENST00000507042 360 ntBASIC17.25■□□□□ 0.35
CLK1P49759 NUDT16P1-203ENST00000513809 620 ntBASIC17.25■□□□□ 0.35
CLK1P49759 PRSS44-201ENST00000515154 1146 ntBASIC17.25■□□□□ 0.35
CLK1P49759 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.25■□□□□ 0.35
CLK1P49759 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC17.25■□□□□ 0.35
CLK1P49759 MIR6786-201ENST00000616843 113 ntBASIC17.25■□□□□ 0.35
CLK1P49759 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLK1P49759 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
CLK1P49759 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CLK1P49759 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLK1P49759 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CLK1P49759 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLK1P49759 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CLK1P49759 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLK1P49759 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CLK1P49759 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLK1P49759 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CLK1P49759 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.24■□□□□ 0.35
CLK1P49759 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLK1P49759 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.24■□□□□ 0.35
CLK1P49759 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLK1P49759 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CLK1P49759 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.24■□□□□ 0.35
CLK1P49759 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CLK1P49759 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLK1P49759 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLK1P49759 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLK1P49759 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLK1P49759 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.24■□□□□ 0.35
CLK1P49759 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLK1P49759 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC17.24■□□□□ 0.35
CLK1P49759 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.24■□□□□ 0.35
CLK1P49759 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.24■□□□□ 0.35
CLK1P49759 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC17.24■□□□□ 0.35
CLK1P49759 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC17.24■□□□□ 0.35
CLK1P49759 GRAP-204ENST00000573099 846 ntTSL 3 BASIC17.24■□□□□ 0.35
CLK1P49759 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC17.24■□□□□ 0.35
CLK1P49759 DGCR10-201ENST00000609839 495 ntBASIC17.24■□□□□ 0.35
CLK1P49759 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CLK1P49759 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.24■□□□□ 0.35
CLK1P49759 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.24■□□□□ 0.35
CLK1P49759 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLK1P49759 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
CLK1P49759 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLK1P49759 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.24■□□□□ 0.35
CLK1P49759 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CLK1P49759 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CLK1P49759 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.24■□□□□ 0.35
CLK1P49759 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLK1P49759 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
CLK1P49759 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.23■□□□□ 0.35
CLK1P49759 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLK1P49759 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLK1P49759 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
CLK1P49759 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CLK1P49759 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
CLK1P49759 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC17.23■□□□□ 0.35
CLK1P49759 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CLK1P49759 AL355355.2-201ENST00000442321 338 ntBASIC17.23■□□□□ 0.35
CLK1P49759 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC17.23■□□□□ 0.35
CLK1P49759 B3GAT3P1-201ENST00000471720 806 ntBASIC17.23■□□□□ 0.35
CLK1P49759 AC091390.4-202ENST00000476426 537 ntBASIC17.23■□□□□ 0.35
CLK1P49759 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC17.23■□□□□ 0.35
CLK1P49759 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC17.23■□□□□ 0.35
CLK1P49759 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC17.23■□□□□ 0.35
CLK1P49759 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
CLK1P49759 AC011298.2-201ENST00000617989 482 ntBASIC17.23■□□□□ 0.35
CLK1P49759 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.23■□□□□ 0.35
CLK1P49759 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.23■□□□□ 0.35
CLK1P49759 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CLK1P49759 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLK1P49759 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLK1P49759 IRX1P1-201ENST00000438849 1838 ntBASIC17.23■□□□□ 0.35
CLK1P49759 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC17.23■□□□□ 0.35
CLK1P49759 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC17.23■□□□□ 0.35
CLK1P49759 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
CLK1P49759 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CLK1P49759 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.23■□□□□ 0.35
CLK1P49759 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.23■□□□□ 0.35
CLK1P49759 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CLK1P49759 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CLK1P49759 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLK1P49759 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLK1P49759 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLK1P49759 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.22■□□□□ 0.35
CLK1P49759 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLK1P49759 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC17.22■□□□□ 0.35
CLK1P49759 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLK1P49759 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLK1P49759 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.22■□□□□ 0.35
CLK1P49759 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLK1P49759 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.22■□□□□ 0.35
CLK1P49759 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
CLK1P49759 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
CLK1P49759 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLK1P49759 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
CLK1P49759 FEM1AP3-201ENST00000403722 1741 ntBASIC17.22■□□□□ 0.35
CLK1P49759 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms