Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
MTHFRP42898 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
MTHFRP42898 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC19.17■□□□□ 0.66
MTHFRP42898 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC19.17■□□□□ 0.66
MTHFRP42898 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.17■□□□□ 0.66
MTHFRP42898 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.17■□□□□ 0.66
MTHFRP42898 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
MTHFRP42898 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC19.17■□□□□ 0.66
MTHFRP42898 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC19.17■□□□□ 0.66
MTHFRP42898 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
MTHFRP42898 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
MTHFRP42898 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.17■□□□□ 0.66
MTHFRP42898 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
MTHFRP42898 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
MTHFRP42898 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC19.16■□□□□ 0.66
MTHFRP42898 UBQLN4P1-201ENST00000461599 1801 ntBASIC19.16■□□□□ 0.66
MTHFRP42898 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
MTHFRP42898 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
MTHFRP42898 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
MTHFRP42898 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
MTHFRP42898 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
MTHFRP42898 CCS-201ENST00000310190 942 ntTSL 5 BASIC19.16■□□□□ 0.66
MTHFRP42898 RPS2P28-201ENST00000314255 741 ntBASIC19.16■□□□□ 0.66
MTHFRP42898 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
MTHFRP42898 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC19.16■□□□□ 0.66
MTHFRP42898 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC19.16■□□□□ 0.66
MTHFRP42898 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC19.16■□□□□ 0.66
MTHFRP42898 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC19.16■□□□□ 0.66
MTHFRP42898 PIN1-206ENST00000587625 878 ntTSL 2 BASIC19.16■□□□□ 0.66
MTHFRP42898 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC19.16■□□□□ 0.66
MTHFRP42898 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC19.16■□□□□ 0.66
MTHFRP42898 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC19.16■□□□□ 0.66
MTHFRP42898 CAND2-206ENST00000626378 333 ntTSL 5 BASIC19.16■□□□□ 0.66
MTHFRP42898 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC19.16■□□□□ 0.66
MTHFRP42898 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
MTHFRP42898 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.16■□□□□ 0.66
MTHFRP42898 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
MTHFRP42898 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
MTHFRP42898 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
MTHFRP42898 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.15■□□□□ 0.66
MTHFRP42898 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
MTHFRP42898 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.15■□□□□ 0.66
MTHFRP42898 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.15■□□□□ 0.66
MTHFRP42898 AC116562.4-201ENST00000641316 2276 ntBASIC19.15■□□□□ 0.66
MTHFRP42898 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.15■□□□□ 0.66
MTHFRP42898 TREX1-205ENST00000625293 1783 ntBASIC19.15■□□□□ 0.66
MTHFRP42898 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MTHFRP42898 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MTHFRP42898 RBM17P3-201ENST00000417687 1192 ntBASIC19.15■□□□□ 0.66
MTHFRP42898 SCARNA2-201ENST00000458748 420 ntBASIC19.15■□□□□ 0.66
MTHFRP42898 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC19.15■□□□□ 0.66
MTHFRP42898 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MTHFRP42898 AL355877.3-201ENST00000622820 899 ntBASIC19.15■□□□□ 0.66
MTHFRP42898 AC068587.9-201ENST00000641814 219 ntBASIC19.15■□□□□ 0.66
MTHFRP42898 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.15■□□□□ 0.66
MTHFRP42898 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MTHFRP42898 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MTHFRP42898 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
MTHFRP42898 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MTHFRP42898 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
MTHFRP42898 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
MTHFRP42898 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
MTHFRP42898 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
MTHFRP42898 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
MTHFRP42898 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
MTHFRP42898 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
MTHFRP42898 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
MTHFRP42898 MIR940-201ENST00000401276 94 ntBASIC19.14■□□□□ 0.65
MTHFRP42898 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
MTHFRP42898 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC19.14■□□□□ 0.65
MTHFRP42898 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
MTHFRP42898 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
MTHFRP42898 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
MTHFRP42898 RPL18-209ENST00000550645 463 ntTSL 5 BASIC19.14■□□□□ 0.65
MTHFRP42898 RPL18-214ENST00000552588 559 ntTSL 3 BASIC19.14■□□□□ 0.65
MTHFRP42898 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
MTHFRP42898 AC008687.5-201ENST00000593746 558 ntBASIC19.14■□□□□ 0.65
MTHFRP42898 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC19.14■□□□□ 0.65
MTHFRP42898 MIR7706-201ENST00000613747 67 ntBASIC19.14■□□□□ 0.65
MTHFRP42898 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
MTHFRP42898 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
MTHFRP42898 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
MTHFRP42898 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC19.14■□□□□ 0.65
MTHFRP42898 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC19.14■□□□□ 0.65
MTHFRP42898 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
MTHFRP42898 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
MTHFRP42898 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
MTHFRP42898 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
MTHFRP42898 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
MTHFRP42898 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
MTHFRP42898 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
MTHFRP42898 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC19.13■□□□□ 0.65
MTHFRP42898 AC018445.3-201ENST00000624177 1945 ntBASIC19.13■□□□□ 0.65
MTHFRP42898 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
MTHFRP42898 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.13■□□□□ 0.65
MTHFRP42898 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
MTHFRP42898 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
MTHFRP42898 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
MTHFRP42898 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
MTHFRP42898 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms