Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC19.27■□□□□ 0.68
PDGFRAP16234 AC135776.1-201ENST00000319817 2481 ntBASIC19.27■□□□□ 0.68
PDGFRAP16234 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PDGFRAP16234 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC19.27■□□□□ 0.68
PDGFRAP16234 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
PDGFRAP16234 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
PDGFRAP16234 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
PDGFRAP16234 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
PDGFRAP16234 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC19.27■□□□□ 0.68
PDGFRAP16234 YBX1P2-201ENST00000489612 999 ntBASIC19.27■□□□□ 0.68
PDGFRAP16234 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC19.27■□□□□ 0.68
PDGFRAP16234 AC009065.1-201ENST00000564055 1225 ntBASIC19.27■□□□□ 0.68
PDGFRAP16234 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PDGFRAP16234 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.27■□□□□ 0.68
PDGFRAP16234 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PDGFRAP16234 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
PDGFRAP16234 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
PDGFRAP16234 ESPNP-201ENST00000270691 2015 ntBASIC19.27■□□□□ 0.67
PDGFRAP16234 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
PDGFRAP16234 AL162741.1-201ENST00000565563 1558 ntBASIC19.27■□□□□ 0.67
PDGFRAP16234 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
PDGFRAP16234 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.26■□□□□ 0.67
PDGFRAP16234 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
PDGFRAP16234 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
PDGFRAP16234 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PDGFRAP16234 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.26■□□□□ 0.67
PDGFRAP16234 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PDGFRAP16234 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PDGFRAP16234 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PDGFRAP16234 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
PDGFRAP16234 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PDGFRAP16234 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PDGFRAP16234 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PDGFRAP16234 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PDGFRAP16234 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
PDGFRAP16234 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
PDGFRAP16234 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PDGFRAP16234 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PDGFRAP16234 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC19.26■□□□□ 0.67
PDGFRAP16234 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PDGFRAP16234 ANKRD20A18P-201ENST00000359341 492 ntBASIC19.26■□□□□ 0.67
PDGFRAP16234 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC19.26■□□□□ 0.67
PDGFRAP16234 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC19.26■□□□□ 0.67
PDGFRAP16234 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PDGFRAP16234 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
PDGFRAP16234 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.26■□□□□ 0.67
PDGFRAP16234 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
PDGFRAP16234 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PDGFRAP16234 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC19.26■□□□□ 0.67
PDGFRAP16234 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PDGFRAP16234 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
PDGFRAP16234 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDGFRAP16234 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDGFRAP16234 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDGFRAP16234 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDGFRAP16234 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDGFRAP16234 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
PDGFRAP16234 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
PDGFRAP16234 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDGFRAP16234 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC19.25■□□□□ 0.67
PDGFRAP16234 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDGFRAP16234 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDGFRAP16234 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PDGFRAP16234 GMCL1P1-201ENST00000463439 1581 ntBASIC19.25■□□□□ 0.67
PDGFRAP16234 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
PDGFRAP16234 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDGFRAP16234 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDGFRAP16234 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC19.25■□□□□ 0.67
PDGFRAP16234 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PDGFRAP16234 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC19.25■□□□□ 0.67
PDGFRAP16234 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDGFRAP16234 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC19.25■□□□□ 0.67
PDGFRAP16234 AL445228.2-201ENST00000605589 952 ntBASIC19.25■□□□□ 0.67
PDGFRAP16234 AC140113.3-201ENST00000605663 199 ntBASIC19.25■□□□□ 0.67
PDGFRAP16234 AC011558.1-201ENST00000623459 338 ntBASIC19.25■□□□□ 0.67
PDGFRAP16234 AL590326.2-201ENST00000625139 305 ntBASIC19.25■□□□□ 0.67
PDGFRAP16234 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC19.25■□□□□ 0.67
PDGFRAP16234 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PDGFRAP16234 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC19.25■□□□□ 0.67
PDGFRAP16234 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PDGFRAP16234 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC19.25■□□□□ 0.67
PDGFRAP16234 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDGFRAP16234 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PDGFRAP16234 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
PDGFRAP16234 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PDGFRAP16234 AL354751.1-201ENST00000412768 1863 ntBASIC19.24■□□□□ 0.67
PDGFRAP16234 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC19.24■□□□□ 0.67
PDGFRAP16234 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC19.24■□□□□ 0.67
PDGFRAP16234 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC19.24■□□□□ 0.67
PDGFRAP16234 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PDGFRAP16234 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
PDGFRAP16234 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PDGFRAP16234 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC19.24■□□□□ 0.67
PDGFRAP16234 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC19.24■□□□□ 0.67
PDGFRAP16234 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PDGFRAP16234 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC19.24■□□□□ 0.67
PDGFRAP16234 KRT18P35-201ENST00000510488 1269 ntBASIC19.24■□□□□ 0.67
PDGFRAP16234 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC19.24■□□□□ 0.67
PDGFRAP16234 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PDGFRAP16234 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms