Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 CSF3-203ENST00000394148 622 ntTSL 3 BASIC24.26■■□□□ 1.47
CSB-PGBD3P0DP91 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC24.26■■□□□ 1.47
CSB-PGBD3P0DP91 MEG3-211ENST00000452514 461 ntTSL 3 BASIC24.26■■□□□ 1.47
CSB-PGBD3P0DP91 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC24.26■■□□□ 1.47
CSB-PGBD3P0DP91 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
CSB-PGBD3P0DP91 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
CSB-PGBD3P0DP91 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC24.26■■□□□ 1.47
CSB-PGBD3P0DP91 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
CSB-PGBD3P0DP91 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
CSB-PGBD3P0DP91 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
CSB-PGBD3P0DP91 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC24.25■■□□□ 1.47
CSB-PGBD3P0DP91 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
CSB-PGBD3P0DP91 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC24.25■■□□□ 1.47
CSB-PGBD3P0DP91 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC24.25■■□□□ 1.47
CSB-PGBD3P0DP91 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
CSB-PGBD3P0DP91 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC24.25■■□□□ 1.47
CSB-PGBD3P0DP91 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
CSB-PGBD3P0DP91 FUOM-202ENST00000368551 628 ntTSL 3 BASIC24.25■■□□□ 1.47
CSB-PGBD3P0DP91 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC24.25■■□□□ 1.47
CSB-PGBD3P0DP91 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC24.25■■□□□ 1.47
CSB-PGBD3P0DP91 AC021087.4-201ENST00000563761 564 ntBASIC24.25■■□□□ 1.47
CSB-PGBD3P0DP91 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC24.25■■□□□ 1.47
CSB-PGBD3P0DP91 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC24.25■■□□□ 1.47
CSB-PGBD3P0DP91 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC24.25■■□□□ 1.47
CSB-PGBD3P0DP91 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC24.25■■□□□ 1.47
CSB-PGBD3P0DP91 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
CSB-PGBD3P0DP91 INTS4P1-201ENST00000438455 1935 ntBASIC24.25■■□□□ 1.47
CSB-PGBD3P0DP91 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC24.25■■□□□ 1.47
CSB-PGBD3P0DP91 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
CSB-PGBD3P0DP91 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
CSB-PGBD3P0DP91 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
CSB-PGBD3P0DP91 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC24.25■■□□□ 1.47
CSB-PGBD3P0DP91 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC24.25■■□□□ 1.47
CSB-PGBD3P0DP91 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC24.25■■□□□ 1.47
CSB-PGBD3P0DP91 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC24.24■■□□□ 1.47
CSB-PGBD3P0DP91 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC24.24■■□□□ 1.47
CSB-PGBD3P0DP91 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC24.24■■□□□ 1.47
CSB-PGBD3P0DP91 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
CSB-PGBD3P0DP91 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC24.24■■□□□ 1.47
CSB-PGBD3P0DP91 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
CSB-PGBD3P0DP91 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC24.24■■□□□ 1.47
CSB-PGBD3P0DP91 RPS2P1-201ENST00000434010 821 ntBASIC24.24■■□□□ 1.47
CSB-PGBD3P0DP91 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC24.24■■□□□ 1.47
CSB-PGBD3P0DP91 PAM16-208ENST00000573553 722 ntTSL 2 BASIC24.24■■□□□ 1.47
CSB-PGBD3P0DP91 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC24.24■■□□□ 1.47
CSB-PGBD3P0DP91 AL032819.2-201ENST00000624543 2162 ntBASIC24.24■■□□□ 1.47
CSB-PGBD3P0DP91 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
CSB-PGBD3P0DP91 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
CSB-PGBD3P0DP91 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC24.24■■□□□ 1.47
CSB-PGBD3P0DP91 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC24.24■■□□□ 1.47
CSB-PGBD3P0DP91 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
CSB-PGBD3P0DP91 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC24.24■■□□□ 1.47
CSB-PGBD3P0DP91 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
CSB-PGBD3P0DP91 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
CSB-PGBD3P0DP91 AC005104.2-201ENST00000427818 678 ntBASIC24.23■■□□□ 1.47
CSB-PGBD3P0DP91 MTCL1P1-201ENST00000446207 792 ntBASIC24.23■■□□□ 1.47
CSB-PGBD3P0DP91 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC24.23■■□□□ 1.47
CSB-PGBD3P0DP91 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC24.23■■□□□ 1.47
CSB-PGBD3P0DP91 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
CSB-PGBD3P0DP91 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC24.23■■□□□ 1.47
CSB-PGBD3P0DP91 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC24.23■■□□□ 1.47
CSB-PGBD3P0DP91 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
CSB-PGBD3P0DP91 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
CSB-PGBD3P0DP91 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
CSB-PGBD3P0DP91 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
CSB-PGBD3P0DP91 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
CSB-PGBD3P0DP91 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC24.23■■□□□ 1.47
CSB-PGBD3P0DP91 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
CSB-PGBD3P0DP91 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC24.22■■□□□ 1.47
CSB-PGBD3P0DP91 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
CSB-PGBD3P0DP91 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
CSB-PGBD3P0DP91 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
CSB-PGBD3P0DP91 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC24.22■■□□□ 1.47
CSB-PGBD3P0DP91 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
CSB-PGBD3P0DP91 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
CSB-PGBD3P0DP91 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
CSB-PGBD3P0DP91 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
CSB-PGBD3P0DP91 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC24.22■■□□□ 1.47
CSB-PGBD3P0DP91 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC24.22■■□□□ 1.47
CSB-PGBD3P0DP91 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC24.22■■□□□ 1.47
CSB-PGBD3P0DP91 SART3-203ENST00000546611 1184 ntBASIC24.22■■□□□ 1.47
CSB-PGBD3P0DP91 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC24.22■■□□□ 1.47
CSB-PGBD3P0DP91 AL691403.2-201ENST00000618460 490 ntBASIC24.22■■□□□ 1.47
CSB-PGBD3P0DP91 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC24.22■■□□□ 1.47
CSB-PGBD3P0DP91 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
CSB-PGBD3P0DP91 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
CSB-PGBD3P0DP91 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
CSB-PGBD3P0DP91 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
CSB-PGBD3P0DP91 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
CSB-PGBD3P0DP91 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC24.21■■□□□ 1.47
CSB-PGBD3P0DP91 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
CSB-PGBD3P0DP91 AP005117.1-201ENST00000584346 1413 ntBASIC24.21■■□□□ 1.47
CSB-PGBD3P0DP91 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC24.21■■□□□ 1.47
CSB-PGBD3P0DP91 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC24.21■■□□□ 1.47
CSB-PGBD3P0DP91 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC24.21■■□□□ 1.47
CSB-PGBD3P0DP91 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
CSB-PGBD3P0DP91 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC24.21■■□□□ 1.47
CSB-PGBD3P0DP91 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC24.21■■□□□ 1.47
CSB-PGBD3P0DP91 DANCR-204ENST00000444958 709 ntTSL 3 BASIC24.21■■□□□ 1.47
CSB-PGBD3P0DP91 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms