Protein–RNA interactions for Protein: O60869

EDF1, Endothelial differentiation-related factor 1, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EDF1O60869 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
EDF1O60869 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
EDF1O60869 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
EDF1O60869 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
EDF1O60869 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
EDF1O60869 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC18.07■□□□□ 0.48
EDF1O60869 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
EDF1O60869 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
EDF1O60869 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
EDF1O60869 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
EDF1O60869 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC18.07■□□□□ 0.48
EDF1O60869 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
EDF1O60869 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC18.07■□□□□ 0.48
EDF1O60869 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.07■□□□□ 0.48
EDF1O60869 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.07■□□□□ 0.48
EDF1O60869 RHEB-204ENST00000472642 900 ntTSL 3 BASIC18.07■□□□□ 0.48
EDF1O60869 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC18.07■□□□□ 0.48
EDF1O60869 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.07■□□□□ 0.48
EDF1O60869 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
EDF1O60869 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
EDF1O60869 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
EDF1O60869 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.07■□□□□ 0.48
EDF1O60869 MYC-209ENST00000641252 345 ntBASIC18.07■□□□□ 0.48
EDF1O60869 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
EDF1O60869 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
EDF1O60869 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
EDF1O60869 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
EDF1O60869 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
EDF1O60869 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
EDF1O60869 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
EDF1O60869 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
EDF1O60869 NBPF21P-201ENST00000425093 1451 ntBASIC18.07■□□□□ 0.48
EDF1O60869 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
EDF1O60869 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
EDF1O60869 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
EDF1O60869 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
EDF1O60869 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
EDF1O60869 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.06■□□□□ 0.48
EDF1O60869 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
EDF1O60869 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
EDF1O60869 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
EDF1O60869 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
EDF1O60869 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
EDF1O60869 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
EDF1O60869 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
EDF1O60869 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
EDF1O60869 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
EDF1O60869 AP000593.1-201ENST00000393668 712 ntBASIC18.06■□□□□ 0.48
EDF1O60869 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
EDF1O60869 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC18.06■□□□□ 0.48
EDF1O60869 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
EDF1O60869 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
EDF1O60869 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC18.06■□□□□ 0.48
EDF1O60869 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC18.06■□□□□ 0.48
EDF1O60869 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
EDF1O60869 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC18.06■□□□□ 0.48
EDF1O60869 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC18.06■□□□□ 0.48
EDF1O60869 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
EDF1O60869 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC18.06■□□□□ 0.48
EDF1O60869 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
EDF1O60869 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
EDF1O60869 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
EDF1O60869 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
EDF1O60869 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
EDF1O60869 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC18.05■□□□□ 0.48
EDF1O60869 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC18.05■□□□□ 0.48
EDF1O60869 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
EDF1O60869 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
EDF1O60869 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
EDF1O60869 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
EDF1O60869 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
EDF1O60869 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC18.05■□□□□ 0.48
EDF1O60869 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC18.05■□□□□ 0.48
EDF1O60869 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
EDF1O60869 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
EDF1O60869 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.05■□□□□ 0.48
EDF1O60869 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
EDF1O60869 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
EDF1O60869 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC18.05■□□□□ 0.48
EDF1O60869 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
EDF1O60869 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
EDF1O60869 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC18.05■□□□□ 0.48
EDF1O60869 AC073111.5-205ENST00000641717 521 ntBASIC18.05■□□□□ 0.48
EDF1O60869 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
EDF1O60869 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.05■□□□□ 0.48
EDF1O60869 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.05■□□□□ 0.48
EDF1O60869 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
EDF1O60869 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
EDF1O60869 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
EDF1O60869 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC18.05■□□□□ 0.48
EDF1O60869 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
EDF1O60869 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC18.05■□□□□ 0.48
EDF1O60869 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.04■□□□□ 0.48
EDF1O60869 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
EDF1O60869 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
EDF1O60869 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
EDF1O60869 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
EDF1O60869 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.04■□□□□ 0.48
EDF1O60869 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
EDF1O60869 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms