Protein–RNA interactions for Protein: O43181

NDUFS4, NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial, humanhuman

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS4O43181 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.59■□□□□ 0.41
NDUFS4O43181 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
NDUFS4O43181 MIR149-201ENST00000384879 89 ntBASIC17.59■□□□□ 0.41
NDUFS4O43181 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
NDUFS4O43181 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC17.59■□□□□ 0.41
NDUFS4O43181 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NDUFS4O43181 DUX4L26-201ENST00000489078 1255 ntBASIC17.59■□□□□ 0.41
NDUFS4O43181 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC17.59■□□□□ 0.41
NDUFS4O43181 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17.59■□□□□ 0.41
NDUFS4O43181 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC17.59■□□□□ 0.41
NDUFS4O43181 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NDUFS4O43181 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
NDUFS4O43181 AL157888.1-201ENST00000631930 593 ntBASIC17.59■□□□□ 0.41
NDUFS4O43181 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NDUFS4O43181 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NDUFS4O43181 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
NDUFS4O43181 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.59■□□□□ 0.41
NDUFS4O43181 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.59■□□□□ 0.41
NDUFS4O43181 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NDUFS4O43181 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NDUFS4O43181 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NDUFS4O43181 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NDUFS4O43181 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NDUFS4O43181 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NDUFS4O43181 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
NDUFS4O43181 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
NDUFS4O43181 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
NDUFS4O43181 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.58■□□□□ 0.41
NDUFS4O43181 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
NDUFS4O43181 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
NDUFS4O43181 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
NDUFS4O43181 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
NDUFS4O43181 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
NDUFS4O43181 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.58■□□□□ 0.41
NDUFS4O43181 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.41
NDUFS4O43181 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
NDUFS4O43181 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
NDUFS4O43181 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
NDUFS4O43181 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.58■□□□□ 0.4
NDUFS4O43181 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NDUFS4O43181 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NDUFS4O43181 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
NDUFS4O43181 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
NDUFS4O43181 RASA4DP-201ENST00000460726 1199 ntBASIC17.58■□□□□ 0.4
NDUFS4O43181 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
NDUFS4O43181 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
NDUFS4O43181 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC17.58■□□□□ 0.4
NDUFS4O43181 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
NDUFS4O43181 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC17.58■□□□□ 0.4
NDUFS4O43181 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.58■□□□□ 0.4
NDUFS4O43181 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
NDUFS4O43181 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.58■□□□□ 0.4
NDUFS4O43181 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
NDUFS4O43181 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
NDUFS4O43181 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NDUFS4O43181 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NDUFS4O43181 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NDUFS4O43181 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.57■□□□□ 0.4
NDUFS4O43181 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NDUFS4O43181 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NDUFS4O43181 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NDUFS4O43181 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NDUFS4O43181 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NDUFS4O43181 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
NDUFS4O43181 SPDYE15P-201ENST00000424157 909 ntBASIC17.57■□□□□ 0.4
NDUFS4O43181 HOMER2P1-201ENST00000455653 964 ntBASIC17.57■□□□□ 0.4
NDUFS4O43181 AL359075.1-203ENST00000462729 1002 ntBASIC17.57■□□□□ 0.4
NDUFS4O43181 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC17.57■□□□□ 0.4
NDUFS4O43181 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC17.57■□□□□ 0.4
NDUFS4O43181 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.57■□□□□ 0.4
NDUFS4O43181 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
NDUFS4O43181 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NDUFS4O43181 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.57■□□□□ 0.4
NDUFS4O43181 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
NDUFS4O43181 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
NDUFS4O43181 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NDUFS4O43181 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
NDUFS4O43181 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
NDUFS4O43181 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.57■□□□□ 0.4
NDUFS4O43181 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
NDUFS4O43181 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.56■□□□□ 0.4
NDUFS4O43181 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.56■□□□□ 0.4
NDUFS4O43181 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
NDUFS4O43181 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NDUFS4O43181 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NDUFS4O43181 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
NDUFS4O43181 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC17.56■□□□□ 0.4
NDUFS4O43181 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
NDUFS4O43181 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
NDUFS4O43181 STARP1-201ENST00000397973 869 ntBASIC17.56■□□□□ 0.4
NDUFS4O43181 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC17.56■□□□□ 0.4
NDUFS4O43181 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NDUFS4O43181 AC063952.2-201ENST00000498792 1227 ntBASIC17.56■□□□□ 0.4
NDUFS4O43181 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC17.56■□□□□ 0.4
NDUFS4O43181 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.56■□□□□ 0.4
NDUFS4O43181 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NDUFS4O43181 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NDUFS4O43181 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
NDUFS4O43181 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NDUFS4O43181 AL162741.1-201ENST00000565563 1558 ntBASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms