Protein–RNA interactions for Protein: A6NMK7

CPSF4L, Putative cleavage and polyadenylation specificity factor subunit 4-like protein, humanhuman

Known RBP Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4LA6NMK7 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC16.97■□□□□ 0.31
CPSF4LA6NMK7 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CPSF4LA6NMK7 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.97■□□□□ 0.31
CPSF4LA6NMK7 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16.97■□□□□ 0.31
CPSF4LA6NMK7 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CPSF4LA6NMK7 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CPSF4LA6NMK7 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CPSF4LA6NMK7 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CPSF4LA6NMK7 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CPSF4LA6NMK7 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CPSF4LA6NMK7 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CPSF4LA6NMK7 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CPSF4LA6NMK7 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC16.96■□□□□ 0.31
CPSF4LA6NMK7 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CPSF4LA6NMK7 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC16.96■□□□□ 0.31
CPSF4LA6NMK7 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.96■□□□□ 0.31
CPSF4LA6NMK7 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CPSF4LA6NMK7 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CPSF4LA6NMK7 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CPSF4LA6NMK7 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
CPSF4LA6NMK7 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CPSF4LA6NMK7 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CPSF4LA6NMK7 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC16.96■□□□□ 0.31
CPSF4LA6NMK7 ABHD17AP1-201ENST00000358206 933 ntBASIC16.96■□□□□ 0.31
CPSF4LA6NMK7 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC16.96■□□□□ 0.31
CPSF4LA6NMK7 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CPSF4LA6NMK7 PENK-204ENST00000518770 863 ntTSL 2 BASIC16.96■□□□□ 0.31
CPSF4LA6NMK7 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC16.96■□□□□ 0.31
CPSF4LA6NMK7 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC16.96■□□□□ 0.31
CPSF4LA6NMK7 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC16.96■□□□□ 0.31
CPSF4LA6NMK7 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC16.96■□□□□ 0.31
CPSF4LA6NMK7 REXO1L10P-201ENST00000615707 1290 ntBASIC16.96■□□□□ 0.31
CPSF4LA6NMK7 REXO1L12P-201ENST00000622156 912 ntBASIC16.96■□□□□ 0.31
CPSF4LA6NMK7 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
CPSF4LA6NMK7 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
CPSF4LA6NMK7 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CPSF4LA6NMK7 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CPSF4LA6NMK7 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
CPSF4LA6NMK7 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CPSF4LA6NMK7 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC16.96■□□□□ 0.31
CPSF4LA6NMK7 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CPSF4LA6NMK7 AC008764.6-201ENST00000595909 2069 ntBASIC16.96■□□□□ 0.31
CPSF4LA6NMK7 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CPSF4LA6NMK7 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CPSF4LA6NMK7 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC16.96■□□□□ 0.3
CPSF4LA6NMK7 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CPSF4LA6NMK7 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.96■□□□□ 0.3
CPSF4LA6NMK7 AC034236.2-201ENST00000606662 1610 ntBASIC16.96■□□□□ 0.3
CPSF4LA6NMK7 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
CPSF4LA6NMK7 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CPSF4LA6NMK7 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CPSF4LA6NMK7 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC16.95■□□□□ 0.3
CPSF4LA6NMK7 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CPSF4LA6NMK7 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC16.95■□□□□ 0.3
CPSF4LA6NMK7 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CPSF4LA6NMK7 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CPSF4LA6NMK7 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC16.95■□□□□ 0.3
CPSF4LA6NMK7 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CPSF4LA6NMK7 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CPSF4LA6NMK7 AL355355.2-201ENST00000442321 338 ntBASIC16.95■□□□□ 0.3
CPSF4LA6NMK7 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CPSF4LA6NMK7 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC16.95■□□□□ 0.3
CPSF4LA6NMK7 AP001412.1-201ENST00000608405 714 ntBASIC16.95■□□□□ 0.3
CPSF4LA6NMK7 AL049637.2-201ENST00000641778 930 ntBASIC16.95■□□□□ 0.3
CPSF4LA6NMK7 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CPSF4LA6NMK7 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CPSF4LA6NMK7 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CPSF4LA6NMK7 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CPSF4LA6NMK7 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CPSF4LA6NMK7 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
CPSF4LA6NMK7 POR-209ENST00000439269 1858 ntTSL 2 BASIC16.95■□□□□ 0.3
CPSF4LA6NMK7 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CPSF4LA6NMK7 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CPSF4LA6NMK7 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CPSF4LA6NMK7 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CPSF4LA6NMK7 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CPSF4LA6NMK7 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC16.94■□□□□ 0.3
CPSF4LA6NMK7 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CPSF4LA6NMK7 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CPSF4LA6NMK7 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CPSF4LA6NMK7 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC16.94■□□□□ 0.3
CPSF4LA6NMK7 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
CPSF4LA6NMK7 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CPSF4LA6NMK7 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CPSF4LA6NMK7 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC16.94■□□□□ 0.3
CPSF4LA6NMK7 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CPSF4LA6NMK7 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CPSF4LA6NMK7 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CPSF4LA6NMK7 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CPSF4LA6NMK7 AP000593.1-201ENST00000393668 712 ntBASIC16.94■□□□□ 0.3
CPSF4LA6NMK7 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CPSF4LA6NMK7 AC012618.2-201ENST00000428058 849 ntBASIC16.94■□□□□ 0.3
CPSF4LA6NMK7 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CPSF4LA6NMK7 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CPSF4LA6NMK7 AC233702.5-201ENST00000584107 538 ntBASIC16.94■□□□□ 0.3
CPSF4LA6NMK7 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC16.94■□□□□ 0.3
CPSF4LA6NMK7 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CPSF4LA6NMK7 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CPSF4LA6NMK7 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.94■□□□□ 0.3
CPSF4LA6NMK7 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms