Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 FGFR3P6-201ENST00000457012 610 ntBASIC17.62■□□□□ 0.41
PCDHGA1Q9Y5H4 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
PCDHGA1Q9Y5H4 KRT18P41-201ENST00000518924 1277 ntBASIC17.62■□□□□ 0.41
PCDHGA1Q9Y5H4 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.62■□□□□ 0.41
PCDHGA1Q9Y5H4 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC17.62■□□□□ 0.41
PCDHGA1Q9Y5H4 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.62■□□□□ 0.41
PCDHGA1Q9Y5H4 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC17.62■□□□□ 0.41
PCDHGA1Q9Y5H4 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
PCDHGA1Q9Y5H4 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGA1Q9Y5H4 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.62■□□□□ 0.41
PCDHGA1Q9Y5H4 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
PCDHGA1Q9Y5H4 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGA1Q9Y5H4 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGA1Q9Y5H4 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC17.62■□□□□ 0.41
PCDHGA1Q9Y5H4 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGA1Q9Y5H4 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.62■□□□□ 0.41
PCDHGA1Q9Y5H4 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGA1Q9Y5H4 FP475955.4-201ENST00000623131 1990 ntBASIC17.62■□□□□ 0.41
PCDHGA1Q9Y5H4 KRT8P50-201ENST00000562022 1438 ntBASIC17.62■□□□□ 0.41
PCDHGA1Q9Y5H4 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGA1Q9Y5H4 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGA1Q9Y5H4 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGA1Q9Y5H4 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
PCDHGA1Q9Y5H4 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGA1Q9Y5H4 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGA1Q9Y5H4 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGA1Q9Y5H4 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC17.62■□□□□ 0.41
PCDHGA1Q9Y5H4 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGA1Q9Y5H4 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGA1Q9Y5H4 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.61■□□□□ 0.41
PCDHGA1Q9Y5H4 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGA1Q9Y5H4 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC17.61■□□□□ 0.41
PCDHGA1Q9Y5H4 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGA1Q9Y5H4 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGA1Q9Y5H4 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGA1Q9Y5H4 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.61■□□□□ 0.41
PCDHGA1Q9Y5H4 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGA1Q9Y5H4 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.61■□□□□ 0.41
PCDHGA1Q9Y5H4 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC17.61■□□□□ 0.41
PCDHGA1Q9Y5H4 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGA1Q9Y5H4 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC17.61■□□□□ 0.41
PCDHGA1Q9Y5H4 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGA1Q9Y5H4 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.61■□□□□ 0.41
PCDHGA1Q9Y5H4 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
PCDHGA1Q9Y5H4 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC17.61■□□□□ 0.41
PCDHGA1Q9Y5H4 PAN3-AS1-201ENST00000563843 1351 ntBASIC17.61■□□□□ 0.41
PCDHGA1Q9Y5H4 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGA1Q9Y5H4 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGA1Q9Y5H4 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
PCDHGA1Q9Y5H4 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGA1Q9Y5H4 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC17.6■□□□□ 0.41
PCDHGA1Q9Y5H4 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGA1Q9Y5H4 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
PCDHGA1Q9Y5H4 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGA1Q9Y5H4 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGA1Q9Y5H4 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGA1Q9Y5H4 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
PCDHGA1Q9Y5H4 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC17.6■□□□□ 0.41
PCDHGA1Q9Y5H4 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGA1Q9Y5H4 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC17.6■□□□□ 0.41
PCDHGA1Q9Y5H4 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC17.6■□□□□ 0.41
PCDHGA1Q9Y5H4 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC17.6■□□□□ 0.41
PCDHGA1Q9Y5H4 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC17.6■□□□□ 0.41
PCDHGA1Q9Y5H4 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC17.6■□□□□ 0.41
PCDHGA1Q9Y5H4 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.6■□□□□ 0.41
PCDHGA1Q9Y5H4 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.6■□□□□ 0.41
PCDHGA1Q9Y5H4 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGA1Q9Y5H4 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGA1Q9Y5H4 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGA1Q9Y5H4 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGA1Q9Y5H4 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGA1Q9Y5H4 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGA1Q9Y5H4 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGA1Q9Y5H4 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGA1Q9Y5H4 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
PCDHGA1Q9Y5H4 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGA1Q9Y5H4 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.59■□□□□ 0.41
PCDHGA1Q9Y5H4 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
PCDHGA1Q9Y5H4 AL163051.1-201ENST00000569214 1512 ntBASIC17.59■□□□□ 0.41
PCDHGA1Q9Y5H4 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGA1Q9Y5H4 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGA1Q9Y5H4 TP73-AS1-210ENST00000637775 1455 ntBASIC17.59■□□□□ 0.41
PCDHGA1Q9Y5H4 AC112777.1-201ENST00000540175 1423 ntBASIC17.59■□□□□ 0.41
PCDHGA1Q9Y5H4 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGA1Q9Y5H4 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGA1Q9Y5H4 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGA1Q9Y5H4 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGA1Q9Y5H4 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGA1Q9Y5H4 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGA1Q9Y5H4 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGA1Q9Y5H4 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGA1Q9Y5H4 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC17.59■□□□□ 0.41
PCDHGA1Q9Y5H4 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
PCDHGA1Q9Y5H4 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.59■□□□□ 0.41
PCDHGA1Q9Y5H4 RCN1P2-201ENST00000398357 915 ntBASIC17.59■□□□□ 0.41
PCDHGA1Q9Y5H4 AC009533.2-201ENST00000543664 586 ntBASIC17.59■□□□□ 0.41
PCDHGA1Q9Y5H4 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.59■□□□□ 0.41
PCDHGA1Q9Y5H4 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC17.59■□□□□ 0.41
PCDHGA1Q9Y5H4 MTDHP3-201ENST00000594186 672 ntBASIC17.59■□□□□ 0.41
PCDHGA1Q9Y5H4 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms