Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CTDP1Q9Y5B0 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CTDP1Q9Y5B0 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CTDP1Q9Y5B0 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
CTDP1Q9Y5B0 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CTDP1Q9Y5B0 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CTDP1Q9Y5B0 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC21.24■□□□□ 0.99
CTDP1Q9Y5B0 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CTDP1Q9Y5B0 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CTDP1Q9Y5B0 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CTDP1Q9Y5B0 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CTDP1Q9Y5B0 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CTDP1Q9Y5B0 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC21.23■□□□□ 0.99
CTDP1Q9Y5B0 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CTDP1Q9Y5B0 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CTDP1Q9Y5B0 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
CTDP1Q9Y5B0 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC21.23■□□□□ 0.99
CTDP1Q9Y5B0 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
CTDP1Q9Y5B0 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC21.23■□□□□ 0.99
CTDP1Q9Y5B0 VENTXP7-201ENST00000475503 772 ntBASIC21.23■□□□□ 0.99
CTDP1Q9Y5B0 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CTDP1Q9Y5B0 AC012615.1-201ENST00000565797 1299 ntBASIC21.23■□□□□ 0.99
CTDP1Q9Y5B0 AL121772.3-201ENST00000610840 674 ntBASIC21.23■□□□□ 0.99
CTDP1Q9Y5B0 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC21.23■□□□□ 0.99
CTDP1Q9Y5B0 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CTDP1Q9Y5B0 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CTDP1Q9Y5B0 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC21.23■□□□□ 0.99
CTDP1Q9Y5B0 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
CTDP1Q9Y5B0 PKD1P1-201ENST00000458669 6805 ntBASIC21.23■□□□□ 0.99
CTDP1Q9Y5B0 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CTDP1Q9Y5B0 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
CTDP1Q9Y5B0 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CTDP1Q9Y5B0 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
CTDP1Q9Y5B0 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
CTDP1Q9Y5B0 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
CTDP1Q9Y5B0 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC21.22■□□□□ 0.99
CTDP1Q9Y5B0 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CTDP1Q9Y5B0 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CTDP1Q9Y5B0 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC21.22■□□□□ 0.99
CTDP1Q9Y5B0 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC21.22■□□□□ 0.99
CTDP1Q9Y5B0 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
CTDP1Q9Y5B0 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CTDP1Q9Y5B0 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC21.22■□□□□ 0.99
CTDP1Q9Y5B0 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC21.22■□□□□ 0.99
CTDP1Q9Y5B0 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CTDP1Q9Y5B0 KRT18P41-201ENST00000518924 1277 ntBASIC21.22■□□□□ 0.99
CTDP1Q9Y5B0 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CTDP1Q9Y5B0 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CTDP1Q9Y5B0 Z69720.1-201ENST00000601483 472 ntBASIC21.22■□□□□ 0.99
CTDP1Q9Y5B0 AL049812.1-201ENST00000432563 2267 ntBASIC21.22■□□□□ 0.99
CTDP1Q9Y5B0 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
CTDP1Q9Y5B0 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CTDP1Q9Y5B0 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CTDP1Q9Y5B0 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CTDP1Q9Y5B0 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CTDP1Q9Y5B0 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CTDP1Q9Y5B0 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
CTDP1Q9Y5B0 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CTDP1Q9Y5B0 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CTDP1Q9Y5B0 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CTDP1Q9Y5B0 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC21.21■□□□□ 0.99
CTDP1Q9Y5B0 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC21.21■□□□□ 0.99
CTDP1Q9Y5B0 AC074051.2-201ENST00000565115 352 ntBASIC21.21■□□□□ 0.99
CTDP1Q9Y5B0 RN7SL510P-201ENST00000581311 263 ntBASIC21.21■□□□□ 0.99
CTDP1Q9Y5B0 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC21.21■□□□□ 0.99
CTDP1Q9Y5B0 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC21.21■□□□□ 0.99
CTDP1Q9Y5B0 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
CTDP1Q9Y5B0 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
CTDP1Q9Y5B0 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
CTDP1Q9Y5B0 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC21.21■□□□□ 0.99
CTDP1Q9Y5B0 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CTDP1Q9Y5B0 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC21.21■□□□□ 0.99
CTDP1Q9Y5B0 AL353692.3-201ENST00000407031 1396 ntBASIC21.21■□□□□ 0.99
CTDP1Q9Y5B0 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
CTDP1Q9Y5B0 AC005332.7-201ENST00000614046 2005 ntBASIC21.21■□□□□ 0.99
CTDP1Q9Y5B0 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
CTDP1Q9Y5B0 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CTDP1Q9Y5B0 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.99
CTDP1Q9Y5B0 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC21.2■□□□□ 0.99
CTDP1Q9Y5B0 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC21.2■□□□□ 0.98
CTDP1Q9Y5B0 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
CTDP1Q9Y5B0 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
CTDP1Q9Y5B0 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CTDP1Q9Y5B0 USP39-202ENST00000409025 1946 ntTSL 5 BASIC21.2■□□□□ 0.98
CTDP1Q9Y5B0 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC21.2■□□□□ 0.98
CTDP1Q9Y5B0 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC21.2■□□□□ 0.98
CTDP1Q9Y5B0 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC21.2■□□□□ 0.98
CTDP1Q9Y5B0 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CTDP1Q9Y5B0 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CTDP1Q9Y5B0 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CTDP1Q9Y5B0 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CTDP1Q9Y5B0 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC21.2■□□□□ 0.98
CTDP1Q9Y5B0 AL845331.1-201ENST00000424978 1190 ntBASIC21.2■□□□□ 0.98
CTDP1Q9Y5B0 FOSL1P1-201ENST00000511041 816 ntBASIC21.2■□□□□ 0.98
CTDP1Q9Y5B0 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC21.2■□□□□ 0.98
CTDP1Q9Y5B0 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC21.2■□□□□ 0.98
CTDP1Q9Y5B0 AC091304.2-201ENST00000564639 760 ntBASIC21.2■□□□□ 0.98
CTDP1Q9Y5B0 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC21.2■□□□□ 0.98
CTDP1Q9Y5B0 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CTDP1Q9Y5B0 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms