Protein–RNA interactions for Protein: Q9NWW0

HCFC1R1, Host cell factor C1 regulator 1, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1Q9NWW0 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC19.05■□□□□ 0.64
HCFC1R1Q9NWW0 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.04■□□□□ 0.64
HCFC1R1Q9NWW0 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
HCFC1R1Q9NWW0 IL9RP2-201ENST00000423948 1312 ntBASIC19.04■□□□□ 0.64
HCFC1R1Q9NWW0 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HCFC1R1Q9NWW0 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HCFC1R1Q9NWW0 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
HCFC1R1Q9NWW0 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HCFC1R1Q9NWW0 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HCFC1R1Q9NWW0 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
HCFC1R1Q9NWW0 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HCFC1R1Q9NWW0 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC19.04■□□□□ 0.64
HCFC1R1Q9NWW0 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC19.04■□□□□ 0.64
HCFC1R1Q9NWW0 AC068472.1-201ENST00000474589 881 ntBASIC19.04■□□□□ 0.64
HCFC1R1Q9NWW0 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
HCFC1R1Q9NWW0 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC19.04■□□□□ 0.64
HCFC1R1Q9NWW0 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC19.04■□□□□ 0.64
HCFC1R1Q9NWW0 AL773604.1-201ENST00000617417 272 ntBASIC19.04■□□□□ 0.64
HCFC1R1Q9NWW0 ABBA01031661.1-201ENST00000634362 1253 ntBASIC19.04■□□□□ 0.64
HCFC1R1Q9NWW0 AF228730.7-201ENST00000641842 219 ntBASIC19.04■□□□□ 0.64
HCFC1R1Q9NWW0 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HCFC1R1Q9NWW0 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HCFC1R1Q9NWW0 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.04■□□□□ 0.64
HCFC1R1Q9NWW0 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
HCFC1R1Q9NWW0 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HCFC1R1Q9NWW0 ASL-204ENST00000395331 1538 ntTSL 5 BASIC19.04■□□□□ 0.64
HCFC1R1Q9NWW0 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
HCFC1R1Q9NWW0 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.04■□□□□ 0.64
HCFC1R1Q9NWW0 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC19.04■□□□□ 0.64
HCFC1R1Q9NWW0 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.03■□□□□ 0.64
HCFC1R1Q9NWW0 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC19.03■□□□□ 0.64
HCFC1R1Q9NWW0 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HCFC1R1Q9NWW0 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
HCFC1R1Q9NWW0 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.03■□□□□ 0.64
HCFC1R1Q9NWW0 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HCFC1R1Q9NWW0 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
HCFC1R1Q9NWW0 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
HCFC1R1Q9NWW0 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
HCFC1R1Q9NWW0 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC19.03■□□□□ 0.64
HCFC1R1Q9NWW0 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
HCFC1R1Q9NWW0 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
HCFC1R1Q9NWW0 SLC25A1P1-201ENST00000528351 927 ntBASIC19.03■□□□□ 0.64
HCFC1R1Q9NWW0 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC19.03■□□□□ 0.64
HCFC1R1Q9NWW0 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC19.03■□□□□ 0.64
HCFC1R1Q9NWW0 AC008608.2-201ENST00000606089 416 ntBASIC19.03■□□□□ 0.64
HCFC1R1Q9NWW0 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC19.03■□□□□ 0.64
HCFC1R1Q9NWW0 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
HCFC1R1Q9NWW0 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC19.03■□□□□ 0.64
HCFC1R1Q9NWW0 ANKRD20A8P-203ENST00000641373 517 ntBASIC19.03■□□□□ 0.64
HCFC1R1Q9NWW0 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
HCFC1R1Q9NWW0 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HCFC1R1Q9NWW0 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HCFC1R1Q9NWW0 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HCFC1R1Q9NWW0 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HCFC1R1Q9NWW0 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HCFC1R1Q9NWW0 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
HCFC1R1Q9NWW0 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HCFC1R1Q9NWW0 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HCFC1R1Q9NWW0 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
HCFC1R1Q9NWW0 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
HCFC1R1Q9NWW0 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
HCFC1R1Q9NWW0 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
HCFC1R1Q9NWW0 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
HCFC1R1Q9NWW0 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
HCFC1R1Q9NWW0 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
HCFC1R1Q9NWW0 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
HCFC1R1Q9NWW0 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC19.02■□□□□ 0.64
HCFC1R1Q9NWW0 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HCFC1R1Q9NWW0 MED22-202ENST00000371999 987 ntTSL 3 BASIC19.02■□□□□ 0.64
HCFC1R1Q9NWW0 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC19.02■□□□□ 0.64
HCFC1R1Q9NWW0 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
HCFC1R1Q9NWW0 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC19.02■□□□□ 0.64
HCFC1R1Q9NWW0 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC19.02■□□□□ 0.64
HCFC1R1Q9NWW0 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
HCFC1R1Q9NWW0 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC19.02■□□□□ 0.64
HCFC1R1Q9NWW0 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC19.02■□□□□ 0.64
HCFC1R1Q9NWW0 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
HCFC1R1Q9NWW0 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC19.02■□□□□ 0.64
HCFC1R1Q9NWW0 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC19.02■□□□□ 0.64
HCFC1R1Q9NWW0 AC064862.7-201ENST00000604520 867 ntBASIC19.02■□□□□ 0.64
HCFC1R1Q9NWW0 GPALPP1-207ENST00000611650 899 ntBASIC19.02■□□□□ 0.64
HCFC1R1Q9NWW0 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC19.02■□□□□ 0.64
HCFC1R1Q9NWW0 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HCFC1R1Q9NWW0 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HCFC1R1Q9NWW0 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
HCFC1R1Q9NWW0 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC19.02■□□□□ 0.64
HCFC1R1Q9NWW0 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC19.02■□□□□ 0.64
HCFC1R1Q9NWW0 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
HCFC1R1Q9NWW0 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
HCFC1R1Q9NWW0 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
HCFC1R1Q9NWW0 TP73-AS1-210ENST00000637775 1455 ntBASIC19.02■□□□□ 0.63
HCFC1R1Q9NWW0 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
HCFC1R1Q9NWW0 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
HCFC1R1Q9NWW0 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
HCFC1R1Q9NWW0 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HCFC1R1Q9NWW0 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HCFC1R1Q9NWW0 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HCFC1R1Q9NWW0 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HCFC1R1Q9NWW0 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HCFC1R1Q9NWW0 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms