Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
TLR9Q9NR96 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TLR9Q9NR96 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TLR9Q9NR96 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TLR9Q9NR96 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
TLR9Q9NR96 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC19.44■□□□□ 0.7
TLR9Q9NR96 AC113404.2-201ENST00000507884 177 ntBASIC19.44■□□□□ 0.7
TLR9Q9NR96 POLD2P1-201ENST00000511220 997 ntBASIC19.44■□□□□ 0.7
TLR9Q9NR96 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC19.44■□□□□ 0.7
TLR9Q9NR96 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TLR9Q9NR96 AL355877.3-201ENST00000622820 899 ntBASIC19.44■□□□□ 0.7
TLR9Q9NR96 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TLR9Q9NR96 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TLR9Q9NR96 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.44■□□□□ 0.7
TLR9Q9NR96 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.44■□□□□ 0.7
TLR9Q9NR96 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TLR9Q9NR96 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
TLR9Q9NR96 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TLR9Q9NR96 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.43■□□□□ 0.7
TLR9Q9NR96 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.43■□□□□ 0.7
TLR9Q9NR96 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TLR9Q9NR96 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TLR9Q9NR96 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TLR9Q9NR96 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TLR9Q9NR96 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC19.43■□□□□ 0.7
TLR9Q9NR96 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC19.43■□□□□ 0.7
TLR9Q9NR96 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TLR9Q9NR96 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC19.43■□□□□ 0.7
TLR9Q9NR96 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TLR9Q9NR96 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TLR9Q9NR96 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC19.43■□□□□ 0.7
TLR9Q9NR96 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC19.43■□□□□ 0.7
TLR9Q9NR96 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC19.43■□□□□ 0.7
TLR9Q9NR96 AC139887.3-201ENST00000568585 713 ntBASIC19.43■□□□□ 0.7
TLR9Q9NR96 MIR7706-201ENST00000613747 67 ntBASIC19.43■□□□□ 0.7
TLR9Q9NR96 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
TLR9Q9NR96 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC19.43■□□□□ 0.7
TLR9Q9NR96 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
TLR9Q9NR96 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
TLR9Q9NR96 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
TLR9Q9NR96 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TLR9Q9NR96 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TLR9Q9NR96 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TLR9Q9NR96 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
TLR9Q9NR96 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TLR9Q9NR96 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.43■□□□□ 0.7
TLR9Q9NR96 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC19.42■□□□□ 0.7
TLR9Q9NR96 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TLR9Q9NR96 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.42■□□□□ 0.7
TLR9Q9NR96 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TLR9Q9NR96 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TLR9Q9NR96 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TLR9Q9NR96 MTMR9LP-203ENST00000426597 1545 ntBASIC19.42■□□□□ 0.7
TLR9Q9NR96 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC19.42■□□□□ 0.7
TLR9Q9NR96 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.42■□□□□ 0.7
TLR9Q9NR96 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TLR9Q9NR96 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TLR9Q9NR96 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TLR9Q9NR96 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
TLR9Q9NR96 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TLR9Q9NR96 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
TLR9Q9NR96 RCN1P2-201ENST00000398357 915 ntBASIC19.42■□□□□ 0.7
TLR9Q9NR96 MIR1233-2-201ENST00000408138 82 ntBASIC19.42■□□□□ 0.7
TLR9Q9NR96 MIR1233-1-201ENST00000408722 82 ntBASIC19.42■□□□□ 0.7
TLR9Q9NR96 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TLR9Q9NR96 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TLR9Q9NR96 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
TLR9Q9NR96 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
TLR9Q9NR96 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC19.42■□□□□ 0.7
TLR9Q9NR96 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC19.42■□□□□ 0.7
TLR9Q9NR96 COX5A-204ENST00000567270 579 ntTSL 3 BASIC19.42■□□□□ 0.7
TLR9Q9NR96 PRKN-208ENST00000610470 531 ntTSL 2 BASIC19.42■□□□□ 0.7
TLR9Q9NR96 PRKN-209ENST00000612485 225 ntTSL 5 BASIC19.42■□□□□ 0.7
TLR9Q9NR96 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.42■□□□□ 0.7
TLR9Q9NR96 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TLR9Q9NR96 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.42■□□□□ 0.7
TLR9Q9NR96 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TLR9Q9NR96 PMS2P7-201ENST00000506558 1336 ntBASIC19.42■□□□□ 0.7
TLR9Q9NR96 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TLR9Q9NR96 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TLR9Q9NR96 NFYC-AS1-201ENST00000606277 1687 ntBASIC19.42■□□□□ 0.7
TLR9Q9NR96 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC19.42■□□□□ 0.7
TLR9Q9NR96 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TLR9Q9NR96 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TLR9Q9NR96 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TLR9Q9NR96 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TLR9Q9NR96 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TLR9Q9NR96 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TLR9Q9NR96 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TLR9Q9NR96 TP73-AS1-210ENST00000637775 1455 ntBASIC19.41■□□□□ 0.7
TLR9Q9NR96 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TLR9Q9NR96 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TLR9Q9NR96 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC19.41■□□□□ 0.7
TLR9Q9NR96 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TLR9Q9NR96 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TLR9Q9NR96 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
TLR9Q9NR96 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TLR9Q9NR96 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
TLR9Q9NR96 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TLR9Q9NR96 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms