Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.39■□□□□ 0.53
CPNE1Q99829 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.39■□□□□ 0.53
CPNE1Q99829 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CPNE1Q99829 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CPNE1Q99829 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CPNE1Q99829 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.39■□□□□ 0.53
CPNE1Q99829 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
CPNE1Q99829 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CPNE1Q99829 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CPNE1Q99829 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CPNE1Q99829 CYP51A1P1-201ENST00000492267 1507 ntBASIC18.39■□□□□ 0.53
CPNE1Q99829 AL163051.1-201ENST00000569214 1512 ntBASIC18.39■□□□□ 0.53
CPNE1Q99829 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CPNE1Q99829 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CPNE1Q99829 AC036111.1-201ENST00000533973 1582 ntBASIC18.38■□□□□ 0.53
CPNE1Q99829 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CPNE1Q99829 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CPNE1Q99829 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CPNE1Q99829 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CPNE1Q99829 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.38■□□□□ 0.53
CPNE1Q99829 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.38■□□□□ 0.53
CPNE1Q99829 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CPNE1Q99829 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.38■□□□□ 0.53
CPNE1Q99829 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CPNE1Q99829 PRORSD1P-201ENST00000295112 541 ntBASIC18.38■□□□□ 0.53
CPNE1Q99829 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CPNE1Q99829 PEX7-202ENST00000367756 680 ntTSL 3 BASIC18.38■□□□□ 0.53
CPNE1Q99829 CRYGFP-201ENST00000418459 633 ntBASIC18.38■□□□□ 0.53
CPNE1Q99829 AC012618.2-201ENST00000428058 849 ntBASIC18.38■□□□□ 0.53
CPNE1Q99829 TSPY20P-201ENST00000450910 630 ntBASIC18.38■□□□□ 0.53
CPNE1Q99829 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC18.38■□□□□ 0.53
CPNE1Q99829 MIR4674-201ENST00000582457 87 ntBASIC18.38■□□□□ 0.53
CPNE1Q99829 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.38■□□□□ 0.53
CPNE1Q99829 REXO1L10P-201ENST00000615707 1290 ntBASIC18.38■□□□□ 0.53
CPNE1Q99829 REXO1L12P-201ENST00000622156 912 ntBASIC18.38■□□□□ 0.53
CPNE1Q99829 AC113410.3-201ENST00000623366 203 ntBASIC18.38■□□□□ 0.53
CPNE1Q99829 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CPNE1Q99829 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CPNE1Q99829 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CPNE1Q99829 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CPNE1Q99829 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CPNE1Q99829 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.38■□□□□ 0.53
CPNE1Q99829 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CPNE1Q99829 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.38■□□□□ 0.53
CPNE1Q99829 AC009102.3-201ENST00000623118 1491 ntBASIC18.38■□□□□ 0.53
CPNE1Q99829 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CPNE1Q99829 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CPNE1Q99829 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CPNE1Q99829 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CPNE1Q99829 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CPNE1Q99829 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CPNE1Q99829 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
CPNE1Q99829 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
CPNE1Q99829 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CPNE1Q99829 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
CPNE1Q99829 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.37■□□□□ 0.53
CPNE1Q99829 SDHAP2-201ENST00000455183 2001 ntBASIC18.37■□□□□ 0.53
CPNE1Q99829 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CPNE1Q99829 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CPNE1Q99829 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.37■□□□□ 0.53
CPNE1Q99829 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC18.37■□□□□ 0.53
CPNE1Q99829 MIR149-201ENST00000384879 89 ntBASIC18.37■□□□□ 0.53
CPNE1Q99829 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CPNE1Q99829 UBE2SP1-201ENST00000450587 669 ntBASIC18.37■□□□□ 0.53
CPNE1Q99829 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC18.37■□□□□ 0.53
CPNE1Q99829 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CPNE1Q99829 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CPNE1Q99829 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CPNE1Q99829 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CPNE1Q99829 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC18.37■□□□□ 0.53
CPNE1Q99829 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC18.37■□□□□ 0.53
CPNE1Q99829 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC18.37■□□□□ 0.53
CPNE1Q99829 DECR2-212ENST00000627716 352 ntTSL 2 BASIC18.37■□□□□ 0.53
CPNE1Q99829 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CPNE1Q99829 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CPNE1Q99829 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CPNE1Q99829 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CPNE1Q99829 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CPNE1Q99829 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CPNE1Q99829 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CPNE1Q99829 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC18.37■□□□□ 0.53
CPNE1Q99829 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CPNE1Q99829 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
CPNE1Q99829 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
CPNE1Q99829 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CPNE1Q99829 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CPNE1Q99829 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CPNE1Q99829 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CPNE1Q99829 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CPNE1Q99829 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CPNE1Q99829 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CPNE1Q99829 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CPNE1Q99829 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
CPNE1Q99829 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CPNE1Q99829 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CPNE1Q99829 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.36■□□□□ 0.53
CPNE1Q99829 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CPNE1Q99829 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CPNE1Q99829 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
CPNE1Q99829 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms