Protein–RNA interactions for Protein: Q96M42

LINC00479, Putative uncharacterized protein encoded by LINC00479, humanhuman

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00479Q96M42 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LINC00479Q96M42 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LINC00479Q96M42 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC14.05□□□□□ -0.16
LINC00479Q96M42 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC14.05□□□□□ -0.16
LINC00479Q96M42 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC14.05□□□□□ -0.16
LINC00479Q96M42 OAS3-207ENST00000551007 998 ntTSL 2 BASIC14.05□□□□□ -0.16
LINC00479Q96M42 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC14.05□□□□□ -0.16
LINC00479Q96M42 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC14.05□□□□□ -0.16
LINC00479Q96M42 AC092118.2-201ENST00000613495 667 ntBASIC14.05□□□□□ -0.16
LINC00479Q96M42 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC14.05□□□□□ -0.16
LINC00479Q96M42 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LINC00479Q96M42 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC14.05□□□□□ -0.16
LINC00479Q96M42 AC073111.5-205ENST00000641717 521 ntBASIC14.05□□□□□ -0.16
LINC00479Q96M42 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
LINC00479Q96M42 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
LINC00479Q96M42 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LINC00479Q96M42 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC14.05□□□□□ -0.16
LINC00479Q96M42 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LINC00479Q96M42 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC14.05□□□□□ -0.16
LINC00479Q96M42 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
LINC00479Q96M42 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
LINC00479Q96M42 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LINC00479Q96M42 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LINC00479Q96M42 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LINC00479Q96M42 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LINC00479Q96M42 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
LINC00479Q96M42 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC14.05□□□□□ -0.16
LINC00479Q96M42 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LINC00479Q96M42 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LINC00479Q96M42 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC14.05□□□□□ -0.16
LINC00479Q96M42 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LINC00479Q96M42 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
LINC00479Q96M42 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC14.04□□□□□ -0.16
LINC00479Q96M42 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC00479Q96M42 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LINC00479Q96M42 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC00479Q96M42 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LINC00479Q96M42 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC00479Q96M42 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC00479Q96M42 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LINC00479Q96M42 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LINC00479Q96M42 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC00479Q96M42 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC00479Q96M42 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC00479Q96M42 MIR663A-201ENST00000385250 93 ntBASIC14.04□□□□□ -0.16
LINC00479Q96M42 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LINC00479Q96M42 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC00479Q96M42 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC14.04□□□□□ -0.16
LINC00479Q96M42 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC14.04□□□□□ -0.16
LINC00479Q96M42 F2R-202ENST00000505600 442 ntTSL 2 BASIC14.04□□□□□ -0.16
LINC00479Q96M42 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC00479Q96M42 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC00479Q96M42 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC14.04□□□□□ -0.16
LINC00479Q96M42 SOX15-203ENST00000570788 1093 ntBASIC14.04□□□□□ -0.16
LINC00479Q96M42 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
LINC00479Q96M42 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC14.04□□□□□ -0.16
LINC00479Q96M42 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC14.04□□□□□ -0.16
LINC00479Q96M42 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC00479Q96M42 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC14.04□□□□□ -0.16
LINC00479Q96M42 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
LINC00479Q96M42 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC00479Q96M42 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC14.04□□□□□ -0.16
LINC00479Q96M42 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC14.04□□□□□ -0.16
LINC00479Q96M42 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
LINC00479Q96M42 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC00479Q96M42 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC14.04□□□□□ -0.16
LINC00479Q96M42 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC00479Q96M42 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC00479Q96M42 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC14.04□□□□□ -0.16
LINC00479Q96M42 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
LINC00479Q96M42 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
LINC00479Q96M42 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
LINC00479Q96M42 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC14.04□□□□□ -0.16
LINC00479Q96M42 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC00479Q96M42 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC14.03□□□□□ -0.16
LINC00479Q96M42 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00479Q96M42 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00479Q96M42 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC14.03□□□□□ -0.16
LINC00479Q96M42 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC14.03□□□□□ -0.16
LINC00479Q96M42 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC14.03□□□□□ -0.16
LINC00479Q96M42 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00479Q96M42 AC099343.3-201ENST00000605834 2503 ntBASIC14.03□□□□□ -0.16
LINC00479Q96M42 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00479Q96M42 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00479Q96M42 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00479Q96M42 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00479Q96M42 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC14.03□□□□□ -0.16
LINC00479Q96M42 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00479Q96M42 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
LINC00479Q96M42 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00479Q96M42 POU5F1P3-201ENST00000428824 1078 ntBASIC14.03□□□□□ -0.16
LINC00479Q96M42 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC14.03□□□□□ -0.16
LINC00479Q96M42 CDCA4P2-201ENST00000441182 718 ntBASIC14.03□□□□□ -0.16
LINC00479Q96M42 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC14.03□□□□□ -0.16
LINC00479Q96M42 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC14.03□□□□□ -0.16
LINC00479Q96M42 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00479Q96M42 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00479Q96M42 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
LINC00479Q96M42 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00479Q96M42 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms