Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
ECHDC3Q96DC8 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
ECHDC3Q96DC8 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
ECHDC3Q96DC8 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.35■□□□□ 0.53
ECHDC3Q96DC8 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ECHDC3Q96DC8 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.34■□□□□ 0.53
ECHDC3Q96DC8 Z83836.1-201ENST00000624605 1642 ntBASIC18.34■□□□□ 0.53
ECHDC3Q96DC8 GMCL1P1-201ENST00000463439 1581 ntBASIC18.34■□□□□ 0.53
ECHDC3Q96DC8 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ECHDC3Q96DC8 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ECHDC3Q96DC8 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ECHDC3Q96DC8 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
ECHDC3Q96DC8 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.34■□□□□ 0.53
ECHDC3Q96DC8 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC18.34■□□□□ 0.53
ECHDC3Q96DC8 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
ECHDC3Q96DC8 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.34■□□□□ 0.53
ECHDC3Q96DC8 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ECHDC3Q96DC8 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ECHDC3Q96DC8 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
ECHDC3Q96DC8 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ECHDC3Q96DC8 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
ECHDC3Q96DC8 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ECHDC3Q96DC8 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
ECHDC3Q96DC8 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ECHDC3Q96DC8 UPK3BP1-201ENST00000428678 509 ntBASIC18.34■□□□□ 0.53
ECHDC3Q96DC8 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ECHDC3Q96DC8 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC18.34■□□□□ 0.53
ECHDC3Q96DC8 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ECHDC3Q96DC8 KRT8P26-201ENST00000534154 1276 ntBASIC18.34■□□□□ 0.53
ECHDC3Q96DC8 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
ECHDC3Q96DC8 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC18.34■□□□□ 0.53
ECHDC3Q96DC8 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC18.34■□□□□ 0.53
ECHDC3Q96DC8 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC18.34■□□□□ 0.53
ECHDC3Q96DC8 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
ECHDC3Q96DC8 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC18.34■□□□□ 0.53
ECHDC3Q96DC8 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
ECHDC3Q96DC8 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ECHDC3Q96DC8 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
ECHDC3Q96DC8 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.34■□□□□ 0.53
ECHDC3Q96DC8 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ECHDC3Q96DC8 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.34■□□□□ 0.53
ECHDC3Q96DC8 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ECHDC3Q96DC8 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ECHDC3Q96DC8 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ECHDC3Q96DC8 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.34■□□□□ 0.53
ECHDC3Q96DC8 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ECHDC3Q96DC8 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ECHDC3Q96DC8 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.53
ECHDC3Q96DC8 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
ECHDC3Q96DC8 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.33■□□□□ 0.53
ECHDC3Q96DC8 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.33■□□□□ 0.53
ECHDC3Q96DC8 NARF-204ENST00000390006 1766 ntTSL 2 BASIC18.33■□□□□ 0.53
ECHDC3Q96DC8 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
ECHDC3Q96DC8 TSPY22P-201ENST00000427496 604 ntBASIC18.33■□□□□ 0.52
ECHDC3Q96DC8 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ECHDC3Q96DC8 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC18.33■□□□□ 0.52
ECHDC3Q96DC8 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC18.33■□□□□ 0.52
ECHDC3Q96DC8 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
ECHDC3Q96DC8 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
ECHDC3Q96DC8 ESPNP-201ENST00000270691 2015 ntBASIC18.33■□□□□ 0.52
ECHDC3Q96DC8 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ECHDC3Q96DC8 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ECHDC3Q96DC8 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ECHDC3Q96DC8 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC18.32■□□□□ 0.52
ECHDC3Q96DC8 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ECHDC3Q96DC8 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC18.32■□□□□ 0.52
ECHDC3Q96DC8 AC016734.2-201ENST00000624325 1377 ntBASIC18.32■□□□□ 0.52
ECHDC3Q96DC8 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ECHDC3Q96DC8 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ECHDC3Q96DC8 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ECHDC3Q96DC8 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ECHDC3Q96DC8 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ECHDC3Q96DC8 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
ECHDC3Q96DC8 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC18.32■□□□□ 0.52
ECHDC3Q96DC8 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ECHDC3Q96DC8 AL121672.3-201ENST00000608644 468 ntBASIC18.32■□□□□ 0.52
ECHDC3Q96DC8 AC069148.1-201ENST00000608741 768 ntBASIC18.32■□□□□ 0.52
ECHDC3Q96DC8 GXYLT1P4-201ENST00000613576 1192 ntBASIC18.32■□□□□ 0.52
ECHDC3Q96DC8 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC18.32■□□□□ 0.52
ECHDC3Q96DC8 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC18.32■□□□□ 0.52
ECHDC3Q96DC8 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
ECHDC3Q96DC8 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ECHDC3Q96DC8 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
ECHDC3Q96DC8 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ECHDC3Q96DC8 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
ECHDC3Q96DC8 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
ECHDC3Q96DC8 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.31■□□□□ 0.52
ECHDC3Q96DC8 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ECHDC3Q96DC8 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ECHDC3Q96DC8 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
ECHDC3Q96DC8 UBC-206ENST00000538617 1303 ntTSL 5 BASIC18.31■□□□□ 0.52
ECHDC3Q96DC8 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ECHDC3Q96DC8 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.31■□□□□ 0.52
ECHDC3Q96DC8 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
ECHDC3Q96DC8 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ECHDC3Q96DC8 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC18.31■□□□□ 0.52
ECHDC3Q96DC8 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ECHDC3Q96DC8 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC18.31■□□□□ 0.52
ECHDC3Q96DC8 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC18.31■□□□□ 0.52
ECHDC3Q96DC8 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms