Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LMO3Q8TAP4 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
LMO3Q8TAP4 AP000523.1-201ENST00000398242 1049 ntBASIC19.7■□□□□ 0.74
LMO3Q8TAP4 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC19.7■□□□□ 0.74
LMO3Q8TAP4 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC19.7■□□□□ 0.74
LMO3Q8TAP4 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC19.7■□□□□ 0.74
LMO3Q8TAP4 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC19.7■□□□□ 0.74
LMO3Q8TAP4 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LMO3Q8TAP4 ASL-204ENST00000395331 1538 ntTSL 5 BASIC19.7■□□□□ 0.74
LMO3Q8TAP4 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
LMO3Q8TAP4 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LMO3Q8TAP4 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LMO3Q8TAP4 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LMO3Q8TAP4 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC19.69■□□□□ 0.74
LMO3Q8TAP4 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LMO3Q8TAP4 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LMO3Q8TAP4 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC19.69■□□□□ 0.74
LMO3Q8TAP4 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC19.69■□□□□ 0.74
LMO3Q8TAP4 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
LMO3Q8TAP4 AC005521.1-201ENST00000393351 872 ntBASIC19.69■□□□□ 0.74
LMO3Q8TAP4 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC19.69■□□□□ 0.74
LMO3Q8TAP4 AC092865.7-201ENST00000641832 219 ntBASIC19.69■□□□□ 0.74
LMO3Q8TAP4 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.69■□□□□ 0.74
LMO3Q8TAP4 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LMO3Q8TAP4 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LMO3Q8TAP4 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC19.69■□□□□ 0.74
LMO3Q8TAP4 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LMO3Q8TAP4 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
LMO3Q8TAP4 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC19.69■□□□□ 0.74
LMO3Q8TAP4 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
LMO3Q8TAP4 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LMO3Q8TAP4 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LMO3Q8TAP4 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
LMO3Q8TAP4 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC19.69■□□□□ 0.74
LMO3Q8TAP4 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LMO3Q8TAP4 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LMO3Q8TAP4 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LMO3Q8TAP4 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC19.68■□□□□ 0.74
LMO3Q8TAP4 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC19.68■□□□□ 0.74
LMO3Q8TAP4 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LMO3Q8TAP4 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LMO3Q8TAP4 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
LMO3Q8TAP4 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LMO3Q8TAP4 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LMO3Q8TAP4 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC19.68■□□□□ 0.74
LMO3Q8TAP4 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LMO3Q8TAP4 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LMO3Q8TAP4 PVRIG2P-201ENST00000435460 978 ntBASIC19.68■□□□□ 0.74
LMO3Q8TAP4 COX11P1-201ENST00000489116 835 ntBASIC19.68■□□□□ 0.74
LMO3Q8TAP4 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC19.68■□□□□ 0.74
LMO3Q8TAP4 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
LMO3Q8TAP4 AC011558.1-201ENST00000623459 338 ntBASIC19.68■□□□□ 0.74
LMO3Q8TAP4 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
LMO3Q8TAP4 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LMO3Q8TAP4 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
LMO3Q8TAP4 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LMO3Q8TAP4 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LMO3Q8TAP4 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LMO3Q8TAP4 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC19.68■□□□□ 0.74
LMO3Q8TAP4 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LMO3Q8TAP4 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC19.68■□□□□ 0.74
LMO3Q8TAP4 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LMO3Q8TAP4 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
LMO3Q8TAP4 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
LMO3Q8TAP4 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.67■□□□□ 0.74
LMO3Q8TAP4 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LMO3Q8TAP4 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LMO3Q8TAP4 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LMO3Q8TAP4 AL137013.1-201ENST00000432946 1228 ntBASIC19.67■□□□□ 0.74
LMO3Q8TAP4 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
LMO3Q8TAP4 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LMO3Q8TAP4 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC19.67■□□□□ 0.74
LMO3Q8TAP4 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC19.67■□□□□ 0.74
LMO3Q8TAP4 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC19.67■□□□□ 0.74
LMO3Q8TAP4 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LMO3Q8TAP4 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC19.67■□□□□ 0.74
LMO3Q8TAP4 AC079602.3-201ENST00000623931 403 ntBASIC19.67■□□□□ 0.74
LMO3Q8TAP4 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LMO3Q8TAP4 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
LMO3Q8TAP4 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LMO3Q8TAP4 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LMO3Q8TAP4 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LMO3Q8TAP4 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
LMO3Q8TAP4 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LMO3Q8TAP4 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
LMO3Q8TAP4 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
LMO3Q8TAP4 AP000997.3-201ENST00000623333 2250 ntBASIC19.67■□□□□ 0.74
LMO3Q8TAP4 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LMO3Q8TAP4 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
LMO3Q8TAP4 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
LMO3Q8TAP4 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LMO3Q8TAP4 FLJ13224-201ENST00000313737 1514 ntBASIC19.66■□□□□ 0.74
LMO3Q8TAP4 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LMO3Q8TAP4 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
LMO3Q8TAP4 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC19.66■□□□□ 0.74
LMO3Q8TAP4 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LMO3Q8TAP4 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LMO3Q8TAP4 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LMO3Q8TAP4 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LMO3Q8TAP4 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms