Protein–RNA interactions for Protein: Q8NHU2

CFAP61, Cilia- and flagella-associated protein 61, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP61Q8NHU2 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
CFAP61Q8NHU2 AP000692.2-201ENST00000608391 879 ntBASIC18.63■□□□□ 0.57
CFAP61Q8NHU2 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.63■□□□□ 0.57
CFAP61Q8NHU2 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CFAP61Q8NHU2 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CFAP61Q8NHU2 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CFAP61Q8NHU2 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CFAP61Q8NHU2 GAS2L1P1-201ENST00000420145 1480 ntBASIC18.63■□□□□ 0.57
CFAP61Q8NHU2 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CFAP61Q8NHU2 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
CFAP61Q8NHU2 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CFAP61Q8NHU2 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CFAP61Q8NHU2 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
CFAP61Q8NHU2 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
CFAP61Q8NHU2 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.62■□□□□ 0.57
CFAP61Q8NHU2 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
CFAP61Q8NHU2 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CFAP61Q8NHU2 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CFAP61Q8NHU2 UNC93B2-201ENST00000285383 730 ntBASIC18.62■□□□□ 0.57
CFAP61Q8NHU2 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CFAP61Q8NHU2 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.62■□□□□ 0.57
CFAP61Q8NHU2 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC18.62■□□□□ 0.57
CFAP61Q8NHU2 RBM17P1-201ENST00000453646 1190 ntBASIC18.62■□□□□ 0.57
CFAP61Q8NHU2 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
CFAP61Q8NHU2 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CFAP61Q8NHU2 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
CFAP61Q8NHU2 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.62■□□□□ 0.57
CFAP61Q8NHU2 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC18.62■□□□□ 0.57
CFAP61Q8NHU2 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC18.62■□□□□ 0.57
CFAP61Q8NHU2 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC18.62■□□□□ 0.57
CFAP61Q8NHU2 AP000525.1-201ENST00000608286 694 ntBASIC18.62■□□□□ 0.57
CFAP61Q8NHU2 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CFAP61Q8NHU2 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.62■□□□□ 0.57
CFAP61Q8NHU2 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CFAP61Q8NHU2 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CFAP61Q8NHU2 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.62■□□□□ 0.57
CFAP61Q8NHU2 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CFAP61Q8NHU2 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18.62■□□□□ 0.57
CFAP61Q8NHU2 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CFAP61Q8NHU2 FEM1AP3-201ENST00000403722 1741 ntBASIC18.62■□□□□ 0.57
CFAP61Q8NHU2 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
CFAP61Q8NHU2 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
CFAP61Q8NHU2 AC008764.6-201ENST00000595909 2069 ntBASIC18.62■□□□□ 0.57
CFAP61Q8NHU2 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CFAP61Q8NHU2 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CFAP61Q8NHU2 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CFAP61Q8NHU2 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.61■□□□□ 0.57
CFAP61Q8NHU2 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CFAP61Q8NHU2 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.61■□□□□ 0.57
CFAP61Q8NHU2 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
CFAP61Q8NHU2 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.61■□□□□ 0.57
CFAP61Q8NHU2 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CFAP61Q8NHU2 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CFAP61Q8NHU2 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
CFAP61Q8NHU2 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CFAP61Q8NHU2 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC18.61■□□□□ 0.57
CFAP61Q8NHU2 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CFAP61Q8NHU2 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CFAP61Q8NHU2 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CFAP61Q8NHU2 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CFAP61Q8NHU2 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC18.61■□□□□ 0.57
CFAP61Q8NHU2 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.61■□□□□ 0.57
CFAP61Q8NHU2 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CFAP61Q8NHU2 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.61■□□□□ 0.57
CFAP61Q8NHU2 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC18.61■□□□□ 0.57
CFAP61Q8NHU2 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CFAP61Q8NHU2 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CFAP61Q8NHU2 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CFAP61Q8NHU2 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.61■□□□□ 0.57
CFAP61Q8NHU2 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CFAP61Q8NHU2 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC18.61■□□□□ 0.57
CFAP61Q8NHU2 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CFAP61Q8NHU2 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CFAP61Q8NHU2 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC18.61■□□□□ 0.57
CFAP61Q8NHU2 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
CFAP61Q8NHU2 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CFAP61Q8NHU2 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.6■□□□□ 0.57
CFAP61Q8NHU2 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CFAP61Q8NHU2 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CFAP61Q8NHU2 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC18.6■□□□□ 0.57
CFAP61Q8NHU2 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CFAP61Q8NHU2 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CFAP61Q8NHU2 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.6■□□□□ 0.57
CFAP61Q8NHU2 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CFAP61Q8NHU2 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CFAP61Q8NHU2 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CFAP61Q8NHU2 AL390955.1-201ENST00000428694 934 ntBASIC18.6■□□□□ 0.57
CFAP61Q8NHU2 MFAP1P1-201ENST00000442257 1255 ntBASIC18.6■□□□□ 0.57
CFAP61Q8NHU2 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC18.6■□□□□ 0.57
CFAP61Q8NHU2 PRSS44-201ENST00000515154 1146 ntBASIC18.6■□□□□ 0.57
CFAP61Q8NHU2 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC18.6■□□□□ 0.57
CFAP61Q8NHU2 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.6■□□□□ 0.57
CFAP61Q8NHU2 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CFAP61Q8NHU2 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.6■□□□□ 0.57
CFAP61Q8NHU2 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
CFAP61Q8NHU2 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CFAP61Q8NHU2 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.6■□□□□ 0.57
CFAP61Q8NHU2 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CFAP61Q8NHU2 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.6■□□□□ 0.57
CFAP61Q8NHU2 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms