Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SLC44A3Q8N4M1 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.77■□□□□ 0.6
SLC44A3Q8N4M1 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SLC44A3Q8N4M1 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SLC44A3Q8N4M1 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SLC44A3Q8N4M1 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SLC44A3Q8N4M1 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.77■□□□□ 0.6
SLC44A3Q8N4M1 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.77■□□□□ 0.6
SLC44A3Q8N4M1 AC141586.3-201ENST00000562166 1838 ntBASIC18.77■□□□□ 0.6
SLC44A3Q8N4M1 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SLC44A3Q8N4M1 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SLC44A3Q8N4M1 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SLC44A3Q8N4M1 CSF3-203ENST00000394148 622 ntTSL 3 BASIC18.77■□□□□ 0.6
SLC44A3Q8N4M1 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC18.77■□□□□ 0.6
SLC44A3Q8N4M1 KRT18P41-201ENST00000518924 1277 ntBASIC18.77■□□□□ 0.6
SLC44A3Q8N4M1 AC021087.4-201ENST00000563761 564 ntBASIC18.77■□□□□ 0.6
SLC44A3Q8N4M1 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SLC44A3Q8N4M1 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SLC44A3Q8N4M1 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SLC44A3Q8N4M1 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SLC44A3Q8N4M1 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SLC44A3Q8N4M1 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.77■□□□□ 0.59
SLC44A3Q8N4M1 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
SLC44A3Q8N4M1 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SLC44A3Q8N4M1 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.59
SLC44A3Q8N4M1 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
SLC44A3Q8N4M1 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SLC44A3Q8N4M1 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC44A3Q8N4M1 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC18.76■□□□□ 0.59
SLC44A3Q8N4M1 INTS4P1-201ENST00000438455 1935 ntBASIC18.76■□□□□ 0.59
SLC44A3Q8N4M1 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SLC44A3Q8N4M1 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC44A3Q8N4M1 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC44A3Q8N4M1 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SLC44A3Q8N4M1 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SLC44A3Q8N4M1 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC44A3Q8N4M1 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SLC44A3Q8N4M1 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.76■□□□□ 0.59
SLC44A3Q8N4M1 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC44A3Q8N4M1 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC18.76■□□□□ 0.59
SLC44A3Q8N4M1 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SLC44A3Q8N4M1 FAM197Y3-203ENST00000618346 717 ntBASIC18.76■□□□□ 0.59
SLC44A3Q8N4M1 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC18.76■□□□□ 0.59
SLC44A3Q8N4M1 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SLC44A3Q8N4M1 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.76■□□□□ 0.59
SLC44A3Q8N4M1 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC44A3Q8N4M1 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC44A3Q8N4M1 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
SLC44A3Q8N4M1 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC44A3Q8N4M1 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
SLC44A3Q8N4M1 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC44A3Q8N4M1 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.76■□□□□ 0.59
SLC44A3Q8N4M1 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
SLC44A3Q8N4M1 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC18.76■□□□□ 0.59
SLC44A3Q8N4M1 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC44A3Q8N4M1 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC44A3Q8N4M1 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.76■□□□□ 0.59
SLC44A3Q8N4M1 HEIH-201ENST00000623091 1652 ntBASIC18.76■□□□□ 0.59
SLC44A3Q8N4M1 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SLC44A3Q8N4M1 AP005117.1-201ENST00000584346 1413 ntBASIC18.75■□□□□ 0.59
SLC44A3Q8N4M1 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLC44A3Q8N4M1 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.75■□□□□ 0.59
SLC44A3Q8N4M1 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLC44A3Q8N4M1 UPF3AP3-201ENST00000420996 769 ntBASIC18.75■□□□□ 0.59
SLC44A3Q8N4M1 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC18.75■□□□□ 0.59
SLC44A3Q8N4M1 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.75■□□□□ 0.59
SLC44A3Q8N4M1 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC18.75■□□□□ 0.59
SLC44A3Q8N4M1 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLC44A3Q8N4M1 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC18.75■□□□□ 0.59
SLC44A3Q8N4M1 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC18.75■□□□□ 0.59
SLC44A3Q8N4M1 PAM16-208ENST00000573553 722 ntTSL 2 BASIC18.75■□□□□ 0.59
SLC44A3Q8N4M1 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC18.75■□□□□ 0.59
SLC44A3Q8N4M1 AC008687.5-201ENST00000593746 558 ntBASIC18.75■□□□□ 0.59
SLC44A3Q8N4M1 AL356488.2-201ENST00000602755 427 ntBASIC18.75■□□□□ 0.59
SLC44A3Q8N4M1 AC140113.2-201ENST00000604370 208 ntBASIC18.75■□□□□ 0.59
SLC44A3Q8N4M1 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
SLC44A3Q8N4M1 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SLC44A3Q8N4M1 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.75■□□□□ 0.59
SLC44A3Q8N4M1 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLC44A3Q8N4M1 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLC44A3Q8N4M1 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
SLC44A3Q8N4M1 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SLC44A3Q8N4M1 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SLC44A3Q8N4M1 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18.74■□□□□ 0.59
SLC44A3Q8N4M1 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
SLC44A3Q8N4M1 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
SLC44A3Q8N4M1 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.74■□□□□ 0.59
SLC44A3Q8N4M1 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
SLC44A3Q8N4M1 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC18.74■□□□□ 0.59
SLC44A3Q8N4M1 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC44A3Q8N4M1 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SLC44A3Q8N4M1 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.74■□□□□ 0.59
SLC44A3Q8N4M1 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC44A3Q8N4M1 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC18.74■□□□□ 0.59
SLC44A3Q8N4M1 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC18.74■□□□□ 0.59
SLC44A3Q8N4M1 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SLC44A3Q8N4M1 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC44A3Q8N4M1 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC18.74■□□□□ 0.59
SLC44A3Q8N4M1 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC44A3Q8N4M1 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms