Protein–RNA interactions for Protein: Q6ZUS6

CCDC149, Coiled-coil domain-containing protein 149, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149Q6ZUS6 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
CCDC149Q6ZUS6 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC149Q6ZUS6 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC149Q6ZUS6 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC149Q6ZUS6 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC149Q6ZUS6 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC149Q6ZUS6 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC19.28■□□□□ 0.68
CCDC149Q6ZUS6 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC149Q6ZUS6 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CCDC149Q6ZUS6 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC149Q6ZUS6 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC149Q6ZUS6 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
CCDC149Q6ZUS6 KRT18P13-201ENST00000400056 1290 ntBASIC19.28■□□□□ 0.68
CCDC149Q6ZUS6 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CCDC149Q6ZUS6 RPP21-221ENST00000428040 594 ntTSL 2 BASIC19.28■□□□□ 0.68
CCDC149Q6ZUS6 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC149Q6ZUS6 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CCDC149Q6ZUS6 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC19.28■□□□□ 0.68
CCDC149Q6ZUS6 AC113404.2-201ENST00000507884 177 ntBASIC19.28■□□□□ 0.68
CCDC149Q6ZUS6 CDV3-207ENST00000508481 661 ntTSL 3 BASIC19.28■□□□□ 0.68
CCDC149Q6ZUS6 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC19.28■□□□□ 0.68
CCDC149Q6ZUS6 AP005901.3-202ENST00000581653 237 ntBASIC19.28■□□□□ 0.68
CCDC149Q6ZUS6 IGHV3OR16-7-201ENST00000604106 360 ntBASIC19.28■□□□□ 0.68
CCDC149Q6ZUS6 NME4-212ENST00000621774 904 ntTSL 3 BASIC19.28■□□□□ 0.68
CCDC149Q6ZUS6 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CCDC149Q6ZUS6 TP73-AS1-207ENST00000624167 988 ntBASIC19.28■□□□□ 0.68
CCDC149Q6ZUS6 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC19.28■□□□□ 0.68
CCDC149Q6ZUS6 AF228730.7-201ENST00000641842 219 ntBASIC19.28■□□□□ 0.68
CCDC149Q6ZUS6 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC149Q6ZUS6 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
CCDC149Q6ZUS6 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC149Q6ZUS6 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC149Q6ZUS6 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.28■□□□□ 0.68
CCDC149Q6ZUS6 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC149Q6ZUS6 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC149Q6ZUS6 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC149Q6ZUS6 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC149Q6ZUS6 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC149Q6ZUS6 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC149Q6ZUS6 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
CCDC149Q6ZUS6 AC009102.3-201ENST00000623118 1491 ntBASIC19.28■□□□□ 0.68
CCDC149Q6ZUS6 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC149Q6ZUS6 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.28■□□□□ 0.68
CCDC149Q6ZUS6 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC149Q6ZUS6 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
CCDC149Q6ZUS6 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC19.27■□□□□ 0.68
CCDC149Q6ZUS6 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC149Q6ZUS6 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
CCDC149Q6ZUS6 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC149Q6ZUS6 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC149Q6ZUS6 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.27■□□□□ 0.68
CCDC149Q6ZUS6 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC149Q6ZUS6 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC149Q6ZUS6 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.27■□□□□ 0.68
CCDC149Q6ZUS6 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC149Q6ZUS6 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC149Q6ZUS6 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
CCDC149Q6ZUS6 TLE1-202ENST00000376484 666 ntTSL 3 BASIC19.27■□□□□ 0.68
CCDC149Q6ZUS6 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC149Q6ZUS6 POM121L3P-201ENST00000419331 1163 ntBASIC19.27■□□□□ 0.68
CCDC149Q6ZUS6 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC19.27■□□□□ 0.68
CCDC149Q6ZUS6 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC19.27■□□□□ 0.68
CCDC149Q6ZUS6 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC19.27■□□□□ 0.68
CCDC149Q6ZUS6 MOK-208ENST00000519058 917 ntTSL 2 BASIC19.27■□□□□ 0.68
CCDC149Q6ZUS6 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
CCDC149Q6ZUS6 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC19.27■□□□□ 0.68
CCDC149Q6ZUS6 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
CCDC149Q6ZUS6 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC19.27■□□□□ 0.68
CCDC149Q6ZUS6 AC139530.3-201ENST00000620344 690 ntBASIC19.27■□□□□ 0.68
CCDC149Q6ZUS6 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC149Q6ZUS6 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC149Q6ZUS6 AL161938.1-201ENST00000569833 2180 ntBASIC19.27■□□□□ 0.68
CCDC149Q6ZUS6 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC149Q6ZUS6 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CCDC149Q6ZUS6 IL9RP2-201ENST00000423948 1312 ntBASIC19.26■□□□□ 0.67
CCDC149Q6ZUS6 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC149Q6ZUS6 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC149Q6ZUS6 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CCDC149Q6ZUS6 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC149Q6ZUS6 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
CCDC149Q6ZUS6 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC149Q6ZUS6 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC149Q6ZUS6 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC149Q6ZUS6 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC149Q6ZUS6 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC19.26■□□□□ 0.67
CCDC149Q6ZUS6 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC149Q6ZUS6 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
CCDC149Q6ZUS6 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC149Q6ZUS6 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC19.26■□□□□ 0.67
CCDC149Q6ZUS6 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC19.26■□□□□ 0.67
CCDC149Q6ZUS6 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC149Q6ZUS6 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC19.26■□□□□ 0.67
CCDC149Q6ZUS6 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC19.26■□□□□ 0.67
CCDC149Q6ZUS6 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
CCDC149Q6ZUS6 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC19.26■□□□□ 0.67
CCDC149Q6ZUS6 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CCDC149Q6ZUS6 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.26■□□□□ 0.67
CCDC149Q6ZUS6 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC149Q6ZUS6 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC149Q6ZUS6 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms