Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC19.72■□□□□ 0.75
CNKSR3Q6P9H4 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC19.72■□□□□ 0.75
CNKSR3Q6P9H4 OR7E14P-202ENST00000530490 1290 ntBASIC19.72■□□□□ 0.75
CNKSR3Q6P9H4 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CNKSR3Q6P9H4 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC19.72■□□□□ 0.75
CNKSR3Q6P9H4 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
CNKSR3Q6P9H4 AC140113.2-201ENST00000604370 208 ntBASIC19.72■□□□□ 0.75
CNKSR3Q6P9H4 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
CNKSR3Q6P9H4 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CNKSR3Q6P9H4 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.72■□□□□ 0.75
CNKSR3Q6P9H4 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC19.72■□□□□ 0.75
CNKSR3Q6P9H4 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CNKSR3Q6P9H4 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.72■□□□□ 0.75
CNKSR3Q6P9H4 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CNKSR3Q6P9H4 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
CNKSR3Q6P9H4 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CNKSR3Q6P9H4 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CNKSR3Q6P9H4 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CNKSR3Q6P9H4 SDHAP2-201ENST00000455183 2001 ntBASIC19.71■□□□□ 0.75
CNKSR3Q6P9H4 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CNKSR3Q6P9H4 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CNKSR3Q6P9H4 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CNKSR3Q6P9H4 AL356309.3-201ENST00000624132 1934 ntBASIC19.71■□□□□ 0.75
CNKSR3Q6P9H4 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
CNKSR3Q6P9H4 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CNKSR3Q6P9H4 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC19.71■□□□□ 0.75
CNKSR3Q6P9H4 AL591424.1-201ENST00000442569 1213 ntBASIC19.71■□□□□ 0.75
CNKSR3Q6P9H4 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC19.71■□□□□ 0.75
CNKSR3Q6P9H4 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC19.71■□□□□ 0.75
CNKSR3Q6P9H4 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC19.71■□□□□ 0.75
CNKSR3Q6P9H4 PNMT-203ENST00000581428 677 ntTSL 2 BASIC19.71■□□□□ 0.75
CNKSR3Q6P9H4 AL691403.2-201ENST00000618460 490 ntBASIC19.71■□□□□ 0.75
CNKSR3Q6P9H4 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC19.71■□□□□ 0.75
CNKSR3Q6P9H4 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CNKSR3Q6P9H4 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CNKSR3Q6P9H4 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CNKSR3Q6P9H4 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CNKSR3Q6P9H4 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC19.71■□□□□ 0.75
CNKSR3Q6P9H4 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
CNKSR3Q6P9H4 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.71■□□□□ 0.75
CNKSR3Q6P9H4 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
CNKSR3Q6P9H4 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.71■□□□□ 0.75
CNKSR3Q6P9H4 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.71■□□□□ 0.75
CNKSR3Q6P9H4 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CNKSR3Q6P9H4 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.7■□□□□ 0.74
CNKSR3Q6P9H4 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CNKSR3Q6P9H4 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19.7■□□□□ 0.74
CNKSR3Q6P9H4 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CNKSR3Q6P9H4 AL032819.2-201ENST00000624543 2162 ntBASIC19.7■□□□□ 0.74
CNKSR3Q6P9H4 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CNKSR3Q6P9H4 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CNKSR3Q6P9H4 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.7■□□□□ 0.74
CNKSR3Q6P9H4 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CNKSR3Q6P9H4 LBH-204ENST00000406087 559 ntTSL 4 BASIC19.7■□□□□ 0.74
CNKSR3Q6P9H4 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC19.7■□□□□ 0.74
CNKSR3Q6P9H4 RAB17-203ENST00000409576 466 ntTSL 3 BASIC19.7■□□□□ 0.74
CNKSR3Q6P9H4 AC098831.1-202ENST00000438821 336 ntBASIC19.7■□□□□ 0.74
CNKSR3Q6P9H4 AC092910.1-201ENST00000482027 1129 ntBASIC19.7■□□□□ 0.74
CNKSR3Q6P9H4 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC19.7■□□□□ 0.74
CNKSR3Q6P9H4 AC034105.1-201ENST00000563488 319 ntBASIC19.7■□□□□ 0.74
CNKSR3Q6P9H4 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC19.7■□□□□ 0.74
CNKSR3Q6P9H4 AL356488.2-201ENST00000602755 427 ntBASIC19.7■□□□□ 0.74
CNKSR3Q6P9H4 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC19.7■□□□□ 0.74
CNKSR3Q6P9H4 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CNKSR3Q6P9H4 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CNKSR3Q6P9H4 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CNKSR3Q6P9H4 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CNKSR3Q6P9H4 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CNKSR3Q6P9H4 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CNKSR3Q6P9H4 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CNKSR3Q6P9H4 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC19.7■□□□□ 0.74
CNKSR3Q6P9H4 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CNKSR3Q6P9H4 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CNKSR3Q6P9H4 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CNKSR3Q6P9H4 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CNKSR3Q6P9H4 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CNKSR3Q6P9H4 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC19.69■□□□□ 0.74
CNKSR3Q6P9H4 AL158211.5-201ENST00000623583 2518 ntBASIC19.69■□□□□ 0.74
CNKSR3Q6P9H4 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC19.69■□□□□ 0.74
CNKSR3Q6P9H4 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CNKSR3Q6P9H4 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CNKSR3Q6P9H4 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
CNKSR3Q6P9H4 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CNKSR3Q6P9H4 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CNKSR3Q6P9H4 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.69■□□□□ 0.74
CNKSR3Q6P9H4 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CNKSR3Q6P9H4 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CNKSR3Q6P9H4 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
CNKSR3Q6P9H4 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CNKSR3Q6P9H4 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CNKSR3Q6P9H4 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC19.69■□□□□ 0.74
CNKSR3Q6P9H4 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC19.69■□□□□ 0.74
CNKSR3Q6P9H4 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CNKSR3Q6P9H4 MYLKP1-201ENST00000509077 1580 ntBASIC19.69■□□□□ 0.74
CNKSR3Q6P9H4 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
CNKSR3Q6P9H4 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CNKSR3Q6P9H4 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.68■□□□□ 0.74
CNKSR3Q6P9H4 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CNKSR3Q6P9H4 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CNKSR3Q6P9H4 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms