Protein–RNA interactions for Protein: Q15878

CACNA1E, Voltage-dependent R-type calcium channel subunit alpha-1E, humanhuman

Predictions only

Length 2,313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1EQ15878 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.85■□□□□ 0.45
CACNA1EQ15878 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC17.85■□□□□ 0.45
CACNA1EQ15878 AL356488.2-201ENST00000602755 427 ntBASIC17.85■□□□□ 0.45
CACNA1EQ15878 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.85■□□□□ 0.45
CACNA1EQ15878 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CACNA1EQ15878 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CACNA1EQ15878 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
CACNA1EQ15878 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CACNA1EQ15878 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
CACNA1EQ15878 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
CACNA1EQ15878 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CACNA1EQ15878 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC17.84■□□□□ 0.45
CACNA1EQ15878 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CACNA1EQ15878 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC17.84■□□□□ 0.45
CACNA1EQ15878 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CACNA1EQ15878 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CACNA1EQ15878 HIST2H3DP1-201ENST00000401004 416 ntBASIC17.84■□□□□ 0.45
CACNA1EQ15878 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.84■□□□□ 0.45
CACNA1EQ15878 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC17.84■□□□□ 0.45
CACNA1EQ15878 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC17.84■□□□□ 0.45
CACNA1EQ15878 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC17.84■□□□□ 0.45
CACNA1EQ15878 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
CACNA1EQ15878 AL691403.2-201ENST00000618460 490 ntBASIC17.84■□□□□ 0.45
CACNA1EQ15878 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.84■□□□□ 0.45
CACNA1EQ15878 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CACNA1EQ15878 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CACNA1EQ15878 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
CACNA1EQ15878 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.84■□□□□ 0.45
CACNA1EQ15878 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CACNA1EQ15878 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CACNA1EQ15878 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CACNA1EQ15878 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CACNA1EQ15878 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC17.84■□□□□ 0.45
CACNA1EQ15878 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CACNA1EQ15878 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC17.84■□□□□ 0.45
CACNA1EQ15878 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CACNA1EQ15878 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC17.84■□□□□ 0.45
CACNA1EQ15878 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC17.84■□□□□ 0.45
CACNA1EQ15878 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC17.84■□□□□ 0.45
CACNA1EQ15878 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC17.84■□□□□ 0.45
CACNA1EQ15878 AFG3L1P-217ENST00000557444 2447 ntBASIC17.84■□□□□ 0.45
CACNA1EQ15878 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CACNA1EQ15878 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
CACNA1EQ15878 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CACNA1EQ15878 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
CACNA1EQ15878 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.84■□□□□ 0.45
CACNA1EQ15878 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CACNA1EQ15878 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.83■□□□□ 0.45
CACNA1EQ15878 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CACNA1EQ15878 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CACNA1EQ15878 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.83■□□□□ 0.45
CACNA1EQ15878 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.83■□□□□ 0.45
CACNA1EQ15878 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC17.83■□□□□ 0.45
CACNA1EQ15878 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC17.83■□□□□ 0.45
CACNA1EQ15878 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CACNA1EQ15878 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.83■□□□□ 0.45
CACNA1EQ15878 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
CACNA1EQ15878 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CACNA1EQ15878 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CACNA1EQ15878 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CACNA1EQ15878 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.83■□□□□ 0.44
CACNA1EQ15878 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC17.83■□□□□ 0.44
CACNA1EQ15878 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC17.83■□□□□ 0.44
CACNA1EQ15878 COX5A-204ENST00000567270 579 ntTSL 3 BASIC17.83■□□□□ 0.44
CACNA1EQ15878 AL139288.1-201ENST00000623748 933 ntBASIC17.83■□□□□ 0.44
CACNA1EQ15878 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CACNA1EQ15878 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CACNA1EQ15878 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CACNA1EQ15878 AC104109.2-201ENST00000602919 1418 ntBASIC17.83■□□□□ 0.44
CACNA1EQ15878 AC093484.2-201ENST00000580996 2166 ntBASIC17.83■□□□□ 0.44
CACNA1EQ15878 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CACNA1EQ15878 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CACNA1EQ15878 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CACNA1EQ15878 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CACNA1EQ15878 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CACNA1EQ15878 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CACNA1EQ15878 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC17.82■□□□□ 0.44
CACNA1EQ15878 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC17.82■□□□□ 0.44
CACNA1EQ15878 CTNS-203ENST00000399306 803 ntTSL 3 BASIC17.82■□□□□ 0.44
CACNA1EQ15878 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CACNA1EQ15878 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.82■□□□□ 0.44
CACNA1EQ15878 AC034105.1-201ENST00000563488 319 ntBASIC17.82■□□□□ 0.44
CACNA1EQ15878 AC021087.4-201ENST00000563761 564 ntBASIC17.82■□□□□ 0.44
CACNA1EQ15878 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC17.82■□□□□ 0.44
CACNA1EQ15878 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC17.82■□□□□ 0.44
CACNA1EQ15878 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.82■□□□□ 0.44
CACNA1EQ15878 FAM215A-202ENST00000632077 792 ntBASIC17.82■□□□□ 0.44
CACNA1EQ15878 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CACNA1EQ15878 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CACNA1EQ15878 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CACNA1EQ15878 BID-204ENST00000399767 2129 ntTSL 2 BASIC17.82■□□□□ 0.44
CACNA1EQ15878 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
CACNA1EQ15878 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CACNA1EQ15878 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC17.82■□□□□ 0.44
CACNA1EQ15878 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CACNA1EQ15878 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CACNA1EQ15878 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CACNA1EQ15878 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.82■□□□□ 0.44
CACNA1EQ15878 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CACNA1EQ15878 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms