Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
CDC42P60953 AC009053.2-201ENST00000563701 2365 ntBASIC16.83■□□□□ 0.28
CDC42P60953 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
CDC42P60953 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC16.83■□□□□ 0.28
CDC42P60953 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
CDC42P60953 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDC42P60953 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.83■□□□□ 0.28
CDC42P60953 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
CDC42P60953 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CDC42P60953 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDC42P60953 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDC42P60953 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CDC42P60953 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CDC42P60953 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.82■□□□□ 0.28
CDC42P60953 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.82■□□□□ 0.28
CDC42P60953 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
CDC42P60953 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CDC42P60953 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDC42P60953 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CDC42P60953 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC16.82■□□□□ 0.28
CDC42P60953 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDC42P60953 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CDC42P60953 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDC42P60953 KRT8P11-201ENST00000409686 1436 ntBASIC16.82■□□□□ 0.28
CDC42P60953 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
CDC42P60953 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CDC42P60953 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CDC42P60953 VPS53-216ENST00000574029 585 ntTSL 4 BASIC16.82■□□□□ 0.28
CDC42P60953 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC16.82■□□□□ 0.28
CDC42P60953 IKBKGP1-201ENST00000612193 1073 ntBASIC16.82■□□□□ 0.28
CDC42P60953 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDC42P60953 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CDC42P60953 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CDC42P60953 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.82■□□□□ 0.28
CDC42P60953 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CDC42P60953 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDC42P60953 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.82■□□□□ 0.28
CDC42P60953 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
CDC42P60953 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CDC42P60953 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CDC42P60953 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDC42P60953 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CDC42P60953 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.81■□□□□ 0.28
CDC42P60953 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC16.81■□□□□ 0.28
CDC42P60953 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDC42P60953 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDC42P60953 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDC42P60953 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDC42P60953 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC16.81■□□□□ 0.28
CDC42P60953 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC16.81■□□□□ 0.28
CDC42P60953 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CDC42P60953 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.81■□□□□ 0.28
CDC42P60953 SNCG-201ENST00000348795 684 ntTSL 2 BASIC16.81■□□□□ 0.28
CDC42P60953 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
CDC42P60953 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDC42P60953 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CDC42P60953 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC16.81■□□□□ 0.28
CDC42P60953 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC16.81■□□□□ 0.28
CDC42P60953 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC16.81■□□□□ 0.28
CDC42P60953 KLF2-202ENST00000592003 564 ntTSL 3 BASIC16.81■□□□□ 0.28
CDC42P60953 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC16.81■□□□□ 0.28
CDC42P60953 Six3os1_6.1-201ENST00000620790 196 ntBASIC16.81■□□□□ 0.28
CDC42P60953 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDC42P60953 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CDC42P60953 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.81■□□□□ 0.28
CDC42P60953 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC16.81■□□□□ 0.28
CDC42P60953 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDC42P60953 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDC42P60953 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.81■□□□□ 0.28
CDC42P60953 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.81■□□□□ 0.28
CDC42P60953 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDC42P60953 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC16.81■□□□□ 0.28
CDC42P60953 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CDC42P60953 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDC42P60953 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDC42P60953 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDC42P60953 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
CDC42P60953 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CDC42P60953 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDC42P60953 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.8■□□□□ 0.28
CDC42P60953 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDC42P60953 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDC42P60953 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.8■□□□□ 0.28
CDC42P60953 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.8■□□□□ 0.28
CDC42P60953 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC16.8■□□□□ 0.28
CDC42P60953 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDC42P60953 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.8■□□□□ 0.28
CDC42P60953 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CDC42P60953 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDC42P60953 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CDC42P60953 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.8■□□□□ 0.28
CDC42P60953 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDC42P60953 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDC42P60953 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDC42P60953 HTR7P1-201ENST00000538670 1336 ntBASIC16.8■□□□□ 0.28
CDC42P60953 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC16.8■□□□□ 0.28
CDC42P60953 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CDC42P60953 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.8■□□□□ 0.28
CDC42P60953 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CDC42P60953 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms