Protein–RNA interactions for Protein: P51157

RAB28, Ras-related protein Rab-28, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P51157 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RAB28P51157 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAB28P51157 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RAB28P51157 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAB28P51157 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RAB28P51157 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RAB28P51157 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAB28P51157 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAB28P51157 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAB28P51157 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.72■□□□□ 0.43
RAB28P51157 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAB28P51157 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.72■□□□□ 0.43
RAB28P51157 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RAB28P51157 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.72■□□□□ 0.43
RAB28P51157 GMCL1P1-201ENST00000463439 1581 ntBASIC17.72■□□□□ 0.43
RAB28P51157 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAB28P51157 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAB28P51157 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAB28P51157 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAB28P51157 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAB28P51157 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAB28P51157 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RAB28P51157 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC17.72■□□□□ 0.43
RAB28P51157 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC17.72■□□□□ 0.43
RAB28P51157 ISCU-203ENST00000431221 799 ntTSL 2 BASIC17.72■□□□□ 0.43
RAB28P51157 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC17.72■□□□□ 0.43
RAB28P51157 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC17.72■□□□□ 0.43
RAB28P51157 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC17.72■□□□□ 0.43
RAB28P51157 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC17.72■□□□□ 0.43
RAB28P51157 DBP-204ENST00000599385 709 ntTSL 3 BASIC17.72■□□□□ 0.43
RAB28P51157 AC024563.2-201ENST00000603282 481 ntBASIC17.72■□□□□ 0.43
RAB28P51157 LITAF-220ENST00000620789 692 ntTSL 5 BASIC17.72■□□□□ 0.43
RAB28P51157 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.72■□□□□ 0.43
RAB28P51157 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAB28P51157 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAB28P51157 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC17.72■□□□□ 0.43
RAB28P51157 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAB28P51157 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAB28P51157 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAB28P51157 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC17.72■□□□□ 0.43
RAB28P51157 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
RAB28P51157 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAB28P51157 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAB28P51157 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.43
RAB28P51157 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.71■□□□□ 0.43
RAB28P51157 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAB28P51157 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAB28P51157 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
RAB28P51157 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAB28P51157 AL024508.2-201ENST00000607749 1894 ntBASIC17.71■□□□□ 0.43
RAB28P51157 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
RAB28P51157 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.71■□□□□ 0.43
RAB28P51157 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAB28P51157 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RAB28P51157 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.71■□□□□ 0.43
RAB28P51157 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAB28P51157 KRT89P-201ENST00000620027 1478 ntBASIC17.71■□□□□ 0.43
RAB28P51157 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RAB28P51157 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAB28P51157 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAB28P51157 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAB28P51157 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAB28P51157 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RAB28P51157 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RAB28P51157 AL645929.1-201ENST00000420084 975 ntBASIC17.71■□□□□ 0.43
RAB28P51157 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAB28P51157 FAM86EP-206ENST00000510506 987 ntBASIC17.71■□□□□ 0.43
RAB28P51157 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC17.71■□□□□ 0.43
RAB28P51157 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC17.71■□□□□ 0.43
RAB28P51157 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
RAB28P51157 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.71■□□□□ 0.43
RAB28P51157 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
RAB28P51157 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.71■□□□□ 0.43
RAB28P51157 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RAB28P51157 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.71■□□□□ 0.43
RAB28P51157 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.71■□□□□ 0.43
RAB28P51157 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC17.71■□□□□ 0.42
RAB28P51157 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.71■□□□□ 0.42
RAB28P51157 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.71■□□□□ 0.42
RAB28P51157 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RAB28P51157 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RAB28P51157 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.7■□□□□ 0.42
RAB28P51157 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RAB28P51157 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RAB28P51157 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
RAB28P51157 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.7■□□□□ 0.42
RAB28P51157 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC17.7■□□□□ 0.42
RAB28P51157 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RAB28P51157 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.7■□□□□ 0.42
RAB28P51157 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.7■□□□□ 0.42
RAB28P51157 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC17.7■□□□□ 0.42
RAB28P51157 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RAB28P51157 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.7■□□□□ 0.42
RAB28P51157 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RAB28P51157 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.7■□□□□ 0.42
RAB28P51157 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RAB28P51157 KRT18P48-201ENST00000434763 852 ntBASIC17.7■□□□□ 0.42
RAB28P51157 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RAB28P51157 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.7■□□□□ 0.42
RAB28P51157 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms