Protein–RNA interactions for Protein: P48764

SLC9A3, Sodium/hydrogen exchanger 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3P48764 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLC9A3P48764 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.88■□□□□ 0.29
SLC9A3P48764 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SLC9A3P48764 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLC9A3P48764 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLC9A3P48764 AC139713.2-201ENST00000641328 2723 ntBASIC16.88■□□□□ 0.29
SLC9A3P48764 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLC9A3P48764 OR6D1P-202ENST00000641007 5290 ntBASIC16.88■□□□□ 0.29
SLC9A3P48764 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SLC9A3P48764 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC16.87■□□□□ 0.29
SLC9A3P48764 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.87■□□□□ 0.29
SLC9A3P48764 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLC9A3P48764 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
SLC9A3P48764 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC16.87■□□□□ 0.29
SLC9A3P48764 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLC9A3P48764 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC16.87■□□□□ 0.29
SLC9A3P48764 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
SLC9A3P48764 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC16.87■□□□□ 0.29
SLC9A3P48764 AC011506.1-201ENST00000474329 610 ntBASIC16.87■□□□□ 0.29
SLC9A3P48764 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC16.87■□□□□ 0.29
SLC9A3P48764 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SLC9A3P48764 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC16.87■□□□□ 0.29
SLC9A3P48764 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC16.87■□□□□ 0.29
SLC9A3P48764 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLC9A3P48764 AP000692.2-201ENST00000608391 879 ntBASIC16.87■□□□□ 0.29
SLC9A3P48764 AL359736.2-201ENST00000621992 437 ntBASIC16.87■□□□□ 0.29
SLC9A3P48764 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLC9A3P48764 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLC9A3P48764 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLC9A3P48764 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLC9A3P48764 AL109659.2-201ENST00000606809 1674 ntBASIC16.87■□□□□ 0.29
SLC9A3P48764 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLC9A3P48764 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLC9A3P48764 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLC9A3P48764 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLC9A3P48764 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLC9A3P48764 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
SLC9A3P48764 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLC9A3P48764 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
SLC9A3P48764 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SLC9A3P48764 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC9A3P48764 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC16.86■□□□□ 0.29
SLC9A3P48764 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC9A3P48764 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.86■□□□□ 0.29
SLC9A3P48764 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC9A3P48764 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC9A3P48764 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
SLC9A3P48764 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC9A3P48764 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC9A3P48764 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
SLC9A3P48764 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SLC9A3P48764 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
SLC9A3P48764 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC16.86■□□□□ 0.29
SLC9A3P48764 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
SLC9A3P48764 KRT18P41-201ENST00000518924 1277 ntBASIC16.86■□□□□ 0.29
SLC9A3P48764 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SLC9A3P48764 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SLC9A3P48764 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC16.86■□□□□ 0.29
SLC9A3P48764 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC16.86■□□□□ 0.29
SLC9A3P48764 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC16.86■□□□□ 0.29
SLC9A3P48764 TNRC18P3-201ENST00000441896 2691 ntBASIC16.86■□□□□ 0.29
SLC9A3P48764 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
SLC9A3P48764 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC9A3P48764 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SLC9A3P48764 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC9A3P48764 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC9A3P48764 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.86■□□□□ 0.29
SLC9A3P48764 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.86■□□□□ 0.29
SLC9A3P48764 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC16.86■□□□□ 0.29
SLC9A3P48764 PKD1P1-201ENST00000458669 6805 ntBASIC16.85■□□□□ 0.29
SLC9A3P48764 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC9A3P48764 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC16.85■□□□□ 0.29
SLC9A3P48764 AC099398.1-201ENST00000567919 2776 ntBASIC16.85■□□□□ 0.29
SLC9A3P48764 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC9A3P48764 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.85■□□□□ 0.29
SLC9A3P48764 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
SLC9A3P48764 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
SLC9A3P48764 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC9A3P48764 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SLC9A3P48764 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC9A3P48764 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC16.85■□□□□ 0.29
SLC9A3P48764 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC16.85■□□□□ 0.29
SLC9A3P48764 FAM201B-201ENST00000458407 597 ntBASIC16.85■□□□□ 0.29
SLC9A3P48764 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC16.85■□□□□ 0.29
SLC9A3P48764 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC16.85■□□□□ 0.29
SLC9A3P48764 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC16.85■□□□□ 0.29
SLC9A3P48764 DGCR10-201ENST00000609839 495 ntBASIC16.85■□□□□ 0.29
SLC9A3P48764 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC16.85■□□□□ 0.29
SLC9A3P48764 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC16.85■□□□□ 0.29
SLC9A3P48764 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SLC9A3P48764 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC9A3P48764 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
SLC9A3P48764 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC9A3P48764 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC9A3P48764 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC9A3P48764 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC9A3P48764 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC9A3P48764 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC16.85■□□□□ 0.29
SLC9A3P48764 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC16.85■□□□□ 0.29
SLC9A3P48764 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms