Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 AC012640.2-201ENST00000561606 901 ntBASIC22.59■■□□□ 1.21
PDE6BP35913 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PDE6BP35913 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
PDE6BP35913 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC22.59■■□□□ 1.21
PDE6BP35913 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PDE6BP35913 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
PDE6BP35913 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC22.59■■□□□ 1.21
PDE6BP35913 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
PDE6BP35913 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
PDE6BP35913 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC22.58■■□□□ 1.21
PDE6BP35913 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.21
PDE6BP35913 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC22.58■■□□□ 1.21
PDE6BP35913 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
PDE6BP35913 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
PDE6BP35913 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.21
PDE6BP35913 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
PDE6BP35913 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
PDE6BP35913 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.21
PDE6BP35913 PMS2P2-201ENST00000425039 1128 ntBASIC22.58■■□□□ 1.21
PDE6BP35913 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC22.58■■□□□ 1.21
PDE6BP35913 HMGN1P19-201ENST00000436976 333 ntBASIC22.58■■□□□ 1.21
PDE6BP35913 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC22.58■■□□□ 1.21
PDE6BP35913 MIR3687-2-201ENST00000577708 61 ntBASIC22.58■■□□□ 1.21
PDE6BP35913 AP001160.2-201ENST00000596071 487 ntBASIC22.58■■□□□ 1.21
PDE6BP35913 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.21
PDE6BP35913 MIR3687-1-201ENST00000614492 61 ntBASIC22.58■■□□□ 1.21
PDE6BP35913 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC22.58■■□□□ 1.21
PDE6BP35913 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC22.58■■□□□ 1.21
PDE6BP35913 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
PDE6BP35913 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
PDE6BP35913 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC22.58■■□□□ 1.2
PDE6BP35913 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
PDE6BP35913 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
PDE6BP35913 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
PDE6BP35913 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PDE6BP35913 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
PDE6BP35913 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
PDE6BP35913 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
PDE6BP35913 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PDE6BP35913 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PDE6BP35913 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
PDE6BP35913 INIP-202ENST00000374236 874 ntTSL 2 BASIC22.57■■□□□ 1.2
PDE6BP35913 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
PDE6BP35913 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
PDE6BP35913 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC22.57■■□□□ 1.2
PDE6BP35913 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC22.57■■□□□ 1.2
PDE6BP35913 AC040169.1-201ENST00000565382 521 ntBASIC22.57■■□□□ 1.2
PDE6BP35913 AC025062.2-201ENST00000605477 670 ntBASIC22.57■■□□□ 1.2
PDE6BP35913 AC008735.5-201ENST00000623544 497 ntBASIC22.57■■□□□ 1.2
PDE6BP35913 AL139288.1-201ENST00000623748 933 ntBASIC22.57■■□□□ 1.2
PDE6BP35913 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC22.57■■□□□ 1.2
PDE6BP35913 AC083906.6-201ENST00000641366 219 ntBASIC22.57■■□□□ 1.2
PDE6BP35913 AC079781.4-201ENST00000641908 219 ntBASIC22.57■■□□□ 1.2
PDE6BP35913 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC22.57■■□□□ 1.2
PDE6BP35913 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
PDE6BP35913 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PDE6BP35913 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC22.57■■□□□ 1.2
PDE6BP35913 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PDE6BP35913 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
PDE6BP35913 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
PDE6BP35913 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PDE6BP35913 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PDE6BP35913 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PDE6BP35913 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PDE6BP35913 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC22.56■■□□□ 1.2
PDE6BP35913 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
PDE6BP35913 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC22.56■■□□□ 1.2
PDE6BP35913 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
PDE6BP35913 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PDE6BP35913 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC22.56■■□□□ 1.2
PDE6BP35913 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC22.56■■□□□ 1.2
PDE6BP35913 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
PDE6BP35913 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PDE6BP35913 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PDE6BP35913 YBX2P1-201ENST00000394192 760 ntBASIC22.56■■□□□ 1.2
PDE6BP35913 DNAJB3-201ENST00000446806 729 ntBASIC22.56■■□□□ 1.2
PDE6BP35913 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC22.56■■□□□ 1.2
PDE6BP35913 AL355385.1-201ENST00000606123 409 ntBASIC22.56■■□□□ 1.2
PDE6BP35913 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC22.56■■□□□ 1.2
PDE6BP35913 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PDE6BP35913 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
PDE6BP35913 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PDE6BP35913 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
PDE6BP35913 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
PDE6BP35913 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC22.55■■□□□ 1.2
PDE6BP35913 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PDE6BP35913 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
PDE6BP35913 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PDE6BP35913 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
PDE6BP35913 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC22.55■■□□□ 1.2
PDE6BP35913 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PDE6BP35913 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
PDE6BP35913 FIS1-203ENST00000442303 631 ntTSL 3 BASIC22.55■■□□□ 1.2
PDE6BP35913 URGCP-206ENST00000446958 365 ntTSL 2 BASIC22.55■■□□□ 1.2
PDE6BP35913 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
PDE6BP35913 AC112482.1-201ENST00000492080 688 ntBASIC22.55■■□□□ 1.2
PDE6BP35913 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC22.55■■□□□ 1.2
PDE6BP35913 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC22.55■■□□□ 1.2
PDE6BP35913 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC22.55■■□□□ 1.2
PDE6BP35913 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms