Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC20.83■□□□□ 0.92
COL11A1P12107 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
COL11A1P12107 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
COL11A1P12107 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
COL11A1P12107 BX640515.1-201ENST00000617215 977 ntBASIC20.83■□□□□ 0.92
COL11A1P12107 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
COL11A1P12107 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
COL11A1P12107 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.82■□□□□ 0.92
COL11A1P12107 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.82■□□□□ 0.92
COL11A1P12107 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
COL11A1P12107 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
COL11A1P12107 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
COL11A1P12107 POM121L3P-201ENST00000419331 1163 ntBASIC20.82■□□□□ 0.92
COL11A1P12107 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
COL11A1P12107 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
COL11A1P12107 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
COL11A1P12107 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
COL11A1P12107 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC20.82■□□□□ 0.92
COL11A1P12107 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
COL11A1P12107 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC20.81■□□□□ 0.92
COL11A1P12107 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
COL11A1P12107 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
COL11A1P12107 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC20.81■□□□□ 0.92
COL11A1P12107 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
COL11A1P12107 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
COL11A1P12107 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
COL11A1P12107 ESPNP-201ENST00000270691 2015 ntBASIC20.81■□□□□ 0.92
COL11A1P12107 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
COL11A1P12107 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
COL11A1P12107 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
COL11A1P12107 THAP5-204ENST00000438865 868 ntTSL 2 BASIC20.81■□□□□ 0.92
COL11A1P12107 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC20.81■□□□□ 0.92
COL11A1P12107 LINC01711-201ENST00000598340 967 ntBASIC20.81■□□□□ 0.92
COL11A1P12107 AC114341.1-201ENST00000618070 349 ntBASIC20.81■□□□□ 0.92
COL11A1P12107 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
COL11A1P12107 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC20.8■□□□□ 0.92
COL11A1P12107 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
COL11A1P12107 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC20.8■□□□□ 0.92
COL11A1P12107 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.8■□□□□ 0.92
COL11A1P12107 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
COL11A1P12107 INTS4P1-201ENST00000438455 1935 ntBASIC20.8■□□□□ 0.92
COL11A1P12107 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
COL11A1P12107 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
COL11A1P12107 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
COL11A1P12107 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
COL11A1P12107 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC20.8■□□□□ 0.92
COL11A1P12107 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC20.8■□□□□ 0.92
COL11A1P12107 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
COL11A1P12107 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC20.8■□□□□ 0.92
COL11A1P12107 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
COL11A1P12107 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
COL11A1P12107 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC20.8■□□□□ 0.92
COL11A1P12107 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
COL11A1P12107 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
COL11A1P12107 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC20.8■□□□□ 0.92
COL11A1P12107 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC20.8■□□□□ 0.92
COL11A1P12107 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
COL11A1P12107 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
COL11A1P12107 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
COL11A1P12107 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
COL11A1P12107 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
COL11A1P12107 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
COL11A1P12107 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC20.79■□□□□ 0.92
COL11A1P12107 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
COL11A1P12107 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
COL11A1P12107 MED22-202ENST00000371999 987 ntTSL 3 BASIC20.79■□□□□ 0.92
COL11A1P12107 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
COL11A1P12107 AL031284.1-201ENST00000419297 478 ntBASIC20.79■□□□□ 0.92
COL11A1P12107 FGFR3P6-201ENST00000457012 610 ntBASIC20.79■□□□□ 0.92
COL11A1P12107 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC20.79■□□□□ 0.92
COL11A1P12107 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC20.79■□□□□ 0.92
COL11A1P12107 AL591684.3-201ENST00000605187 298 ntBASIC20.79■□□□□ 0.92
COL11A1P12107 AC009154.2-201ENST00000621177 724 ntBASIC20.79■□□□□ 0.92
COL11A1P12107 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC20.79■□□□□ 0.92
COL11A1P12107 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
COL11A1P12107 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
COL11A1P12107 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
COL11A1P12107 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
COL11A1P12107 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
COL11A1P12107 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
COL11A1P12107 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
COL11A1P12107 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
COL11A1P12107 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
COL11A1P12107 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
COL11A1P12107 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
COL11A1P12107 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC20.78■□□□□ 0.92
COL11A1P12107 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
COL11A1P12107 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
COL11A1P12107 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC20.78■□□□□ 0.92
COL11A1P12107 AC145285.3-201ENST00000564603 959 ntBASIC20.78■□□□□ 0.92
COL11A1P12107 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC20.78■□□□□ 0.92
COL11A1P12107 AP001269.4-201ENST00000609611 512 ntBASIC20.78■□□□□ 0.92
COL11A1P12107 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
COL11A1P12107 KRT8P47-201ENST00000604727 1398 ntBASIC20.78■□□□□ 0.92
COL11A1P12107 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC20.78■□□□□ 0.92
COL11A1P12107 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
COL11A1P12107 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
COL11A1P12107 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
COL11A1P12107 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
COL11A1P12107 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms