Protein–RNA interactions for Protein: O14579

COPE, Coatomer subunit epsilon, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPEO14579 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
COPEO14579 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
COPEO14579 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
COPEO14579 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC18.41■□□□□ 0.54
COPEO14579 AP003097.1-201ENST00000530657 1135 ntBASIC18.41■□□□□ 0.54
COPEO14579 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.41■□□□□ 0.54
COPEO14579 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC18.41■□□□□ 0.54
COPEO14579 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC18.41■□□□□ 0.54
COPEO14579 AC142086.2-201ENST00000569753 217 ntBASIC18.41■□□□□ 0.54
COPEO14579 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC18.41■□□□□ 0.54
COPEO14579 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
COPEO14579 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
COPEO14579 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
COPEO14579 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.41■□□□□ 0.54
COPEO14579 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
COPEO14579 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
COPEO14579 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
COPEO14579 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
COPEO14579 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
COPEO14579 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
COPEO14579 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.4■□□□□ 0.54
COPEO14579 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
COPEO14579 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC18.4■□□□□ 0.54
COPEO14579 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
COPEO14579 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
COPEO14579 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COPEO14579 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
COPEO14579 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC18.4■□□□□ 0.54
COPEO14579 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.4■□□□□ 0.54
COPEO14579 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COPEO14579 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
COPEO14579 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.4■□□□□ 0.54
COPEO14579 AC012313.1-201ENST00000593393 3059 ntBASIC18.4■□□□□ 0.54
COPEO14579 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.4■□□□□ 0.54
COPEO14579 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COPEO14579 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
COPEO14579 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COPEO14579 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
COPEO14579 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COPEO14579 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COPEO14579 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.4■□□□□ 0.54
COPEO14579 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COPEO14579 GAS7-202ENST00000396115 929 ntTSL 5 BASIC18.4■□□□□ 0.54
COPEO14579 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
COPEO14579 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18.4■□□□□ 0.54
COPEO14579 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COPEO14579 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
COPEO14579 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COPEO14579 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.4■□□□□ 0.54
COPEO14579 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COPEO14579 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
COPEO14579 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.4■□□□□ 0.54
COPEO14579 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.4■□□□□ 0.54
COPEO14579 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
COPEO14579 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
COPEO14579 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
COPEO14579 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
COPEO14579 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COPEO14579 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
COPEO14579 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
COPEO14579 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC18.4■□□□□ 0.54
COPEO14579 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.39■□□□□ 0.54
COPEO14579 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
COPEO14579 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
COPEO14579 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.39■□□□□ 0.54
COPEO14579 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.39■□□□□ 0.54
COPEO14579 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
COPEO14579 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
COPEO14579 AL096828.2-201ENST00000567259 1965 ntBASIC18.39■□□□□ 0.53
COPEO14579 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
COPEO14579 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
COPEO14579 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
COPEO14579 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
COPEO14579 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
COPEO14579 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
COPEO14579 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.39■□□□□ 0.53
COPEO14579 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
COPEO14579 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.39■□□□□ 0.53
COPEO14579 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC18.39■□□□□ 0.53
COPEO14579 NIFKP9-201ENST00000419265 221 ntBASIC18.39■□□□□ 0.53
COPEO14579 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
COPEO14579 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
COPEO14579 AC233263.1-201ENST00000578059 224 ntBASIC18.39■□□□□ 0.53
COPEO14579 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
COPEO14579 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.39■□□□□ 0.53
COPEO14579 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
COPEO14579 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
COPEO14579 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.39■□□□□ 0.53
COPEO14579 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.39■□□□□ 0.53
COPEO14579 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.39■□□□□ 0.53
COPEO14579 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.39■□□□□ 0.53
COPEO14579 GMCL1P1-201ENST00000463439 1581 ntBASIC18.38■□□□□ 0.53
COPEO14579 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
COPEO14579 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
COPEO14579 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
COPEO14579 PRORSD1P-202ENST00000563365 2154 ntBASIC18.38■□□□□ 0.53
COPEO14579 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
COPEO14579 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
COPEO14579 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
COPEO14579 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms