Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
TCRBV9S1A1TA0A576 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
TCRBV9S1A1TA0A576 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
TCRBV9S1A1TA0A576 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
TCRBV9S1A1TA0A576 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TCRBV9S1A1TA0A576 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
TCRBV9S1A1TA0A576 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
TCRBV9S1A1TA0A576 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TCRBV9S1A1TA0A576 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TCRBV9S1A1TA0A576 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
TCRBV9S1A1TA0A576 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
TCRBV9S1A1TA0A576 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TCRBV9S1A1TA0A576 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TCRBV9S1A1TA0A576 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC18.52■□□□□ 0.56
TCRBV9S1A1TA0A576 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC18.52■□□□□ 0.56
TCRBV9S1A1TA0A576 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC18.52■□□□□ 0.56
TCRBV9S1A1TA0A576 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC18.52■□□□□ 0.56
TCRBV9S1A1TA0A576 CD177P1-201ENST00000606252 935 ntBASIC18.52■□□□□ 0.56
TCRBV9S1A1TA0A576 DGCR10-201ENST00000609839 495 ntBASIC18.52■□□□□ 0.56
TCRBV9S1A1TA0A576 AL359736.2-201ENST00000621992 437 ntBASIC18.52■□□□□ 0.56
TCRBV9S1A1TA0A576 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.52■□□□□ 0.56
TCRBV9S1A1TA0A576 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC18.52■□□□□ 0.56
TCRBV9S1A1TA0A576 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
TCRBV9S1A1TA0A576 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TCRBV9S1A1TA0A576 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.52■□□□□ 0.55
TCRBV9S1A1TA0A576 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TCRBV9S1A1TA0A576 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.52■□□□□ 0.55
TCRBV9S1A1TA0A576 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.55
TCRBV9S1A1TA0A576 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TCRBV9S1A1TA0A576 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TCRBV9S1A1TA0A576 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
TCRBV9S1A1TA0A576 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TCRBV9S1A1TA0A576 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.51■□□□□ 0.55
TCRBV9S1A1TA0A576 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TCRBV9S1A1TA0A576 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TCRBV9S1A1TA0A576 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TCRBV9S1A1TA0A576 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
TCRBV9S1A1TA0A576 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TCRBV9S1A1TA0A576 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TCRBV9S1A1TA0A576 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TCRBV9S1A1TA0A576 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
TCRBV9S1A1TA0A576 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TCRBV9S1A1TA0A576 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TCRBV9S1A1TA0A576 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TCRBV9S1A1TA0A576 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
TCRBV9S1A1TA0A576 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC18.51■□□□□ 0.55
TCRBV9S1A1TA0A576 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC18.51■□□□□ 0.55
TCRBV9S1A1TA0A576 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC18.51■□□□□ 0.55
TCRBV9S1A1TA0A576 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.51■□□□□ 0.55
TCRBV9S1A1TA0A576 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
TCRBV9S1A1TA0A576 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TCRBV9S1A1TA0A576 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.51■□□□□ 0.55
TCRBV9S1A1TA0A576 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TCRBV9S1A1TA0A576 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TCRBV9S1A1TA0A576 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TCRBV9S1A1TA0A576 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.51■□□□□ 0.55
TCRBV9S1A1TA0A576 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TCRBV9S1A1TA0A576 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
TCRBV9S1A1TA0A576 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
TCRBV9S1A1TA0A576 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TCRBV9S1A1TA0A576 UROS-202ENST00000368778 1556 ntTSL 2 BASIC18.51■□□□□ 0.55
TCRBV9S1A1TA0A576 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.51■□□□□ 0.55
TCRBV9S1A1TA0A576 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TCRBV9S1A1TA0A576 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TCRBV9S1A1TA0A576 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
TCRBV9S1A1TA0A576 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TCRBV9S1A1TA0A576 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TCRBV9S1A1TA0A576 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
TCRBV9S1A1TA0A576 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TCRBV9S1A1TA0A576 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.5■□□□□ 0.55
TCRBV9S1A1TA0A576 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
TCRBV9S1A1TA0A576 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
TCRBV9S1A1TA0A576 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
TCRBV9S1A1TA0A576 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TCRBV9S1A1TA0A576 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
TCRBV9S1A1TA0A576 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC18.5■□□□□ 0.55
TCRBV9S1A1TA0A576 AC116562.2-201ENST00000507042 360 ntBASIC18.5■□□□□ 0.55
TCRBV9S1A1TA0A576 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC18.5■□□□□ 0.55
TCRBV9S1A1TA0A576 SLC25A1P4-201ENST00000567977 778 ntBASIC18.5■□□□□ 0.55
TCRBV9S1A1TA0A576 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC18.5■□□□□ 0.55
TCRBV9S1A1TA0A576 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.5■□□□□ 0.55
TCRBV9S1A1TA0A576 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TCRBV9S1A1TA0A576 FAM197Y4-202ENST00000622692 608 ntBASIC18.5■□□□□ 0.55
TCRBV9S1A1TA0A576 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TCRBV9S1A1TA0A576 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.5■□□□□ 0.55
TCRBV9S1A1TA0A576 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TCRBV9S1A1TA0A576 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
TCRBV9S1A1TA0A576 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TCRBV9S1A1TA0A576 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TCRBV9S1A1TA0A576 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TCRBV9S1A1TA0A576 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.49■□□□□ 0.55
TCRBV9S1A1TA0A576 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
TCRBV9S1A1TA0A576 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.49■□□□□ 0.55
TCRBV9S1A1TA0A576 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TCRBV9S1A1TA0A576 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TCRBV9S1A1TA0A576 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TCRBV9S1A1TA0A576 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.49■□□□□ 0.55
TCRBV9S1A1TA0A576 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.49■□□□□ 0.55
TCRBV9S1A1TA0A576 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TCRBV9S1A1TA0A576 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms