Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
CCDC196A0A1B0GTZ2 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC21.38■■□□□ 1.01
CCDC196A0A1B0GTZ2 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CCDC196A0A1B0GTZ2 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC21.38■■□□□ 1.01
CCDC196A0A1B0GTZ2 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CCDC196A0A1B0GTZ2 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CCDC196A0A1B0GTZ2 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC21.38■■□□□ 1.01
CCDC196A0A1B0GTZ2 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
CCDC196A0A1B0GTZ2 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC21.38■■□□□ 1.01
CCDC196A0A1B0GTZ2 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
CCDC196A0A1B0GTZ2 BICD1-207ENST00000551848 1962 ntBASIC21.38■■□□□ 1.01
CCDC196A0A1B0GTZ2 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
CCDC196A0A1B0GTZ2 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CCDC196A0A1B0GTZ2 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
CCDC196A0A1B0GTZ2 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
CCDC196A0A1B0GTZ2 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CCDC196A0A1B0GTZ2 RNF152P1-201ENST00000397754 604 ntBASIC21.38■■□□□ 1.01
CCDC196A0A1B0GTZ2 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
CCDC196A0A1B0GTZ2 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC21.38■■□□□ 1.01
CCDC196A0A1B0GTZ2 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC21.38■■□□□ 1.01
CCDC196A0A1B0GTZ2 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC21.38■■□□□ 1.01
CCDC196A0A1B0GTZ2 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC21.38■■□□□ 1.01
CCDC196A0A1B0GTZ2 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC21.38■■□□□ 1.01
CCDC196A0A1B0GTZ2 REEP1-209ENST00000541910 969 ntTSL 2 BASIC21.38■■□□□ 1.01
CCDC196A0A1B0GTZ2 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CCDC196A0A1B0GTZ2 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
CCDC196A0A1B0GTZ2 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC21.38■■□□□ 1.01
CCDC196A0A1B0GTZ2 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC21.38■■□□□ 1.01
CCDC196A0A1B0GTZ2 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CCDC196A0A1B0GTZ2 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC21.37■■□□□ 1.01
CCDC196A0A1B0GTZ2 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CCDC196A0A1B0GTZ2 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CCDC196A0A1B0GTZ2 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CCDC196A0A1B0GTZ2 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CCDC196A0A1B0GTZ2 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC21.37■■□□□ 1.01
CCDC196A0A1B0GTZ2 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
CCDC196A0A1B0GTZ2 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CCDC196A0A1B0GTZ2 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CCDC196A0A1B0GTZ2 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CCDC196A0A1B0GTZ2 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CCDC196A0A1B0GTZ2 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CCDC196A0A1B0GTZ2 RCN1P1-201ENST00000400413 996 ntBASIC21.37■■□□□ 1.01
CCDC196A0A1B0GTZ2 TSPY5P-201ENST00000426936 936 ntBASIC21.37■■□□□ 1.01
CCDC196A0A1B0GTZ2 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC21.37■■□□□ 1.01
CCDC196A0A1B0GTZ2 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC21.37■■□□□ 1.01
CCDC196A0A1B0GTZ2 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC21.37■■□□□ 1.01
CCDC196A0A1B0GTZ2 AL157888.1-201ENST00000631930 593 ntBASIC21.37■■□□□ 1.01
CCDC196A0A1B0GTZ2 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC21.37■■□□□ 1.01
CCDC196A0A1B0GTZ2 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC21.37■■□□□ 1.01
CCDC196A0A1B0GTZ2 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CCDC196A0A1B0GTZ2 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CCDC196A0A1B0GTZ2 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC21.37■■□□□ 1.01
CCDC196A0A1B0GTZ2 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CCDC196A0A1B0GTZ2 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
CCDC196A0A1B0GTZ2 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
CCDC196A0A1B0GTZ2 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CCDC196A0A1B0GTZ2 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
CCDC196A0A1B0GTZ2 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC21.36■■□□□ 1.01
CCDC196A0A1B0GTZ2 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
CCDC196A0A1B0GTZ2 STARP1-201ENST00000397973 869 ntBASIC21.36■■□□□ 1.01
CCDC196A0A1B0GTZ2 AK4P3-201ENST00000418260 669 ntBASIC21.36■■□□□ 1.01
CCDC196A0A1B0GTZ2 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
CCDC196A0A1B0GTZ2 PVRIG2P-201ENST00000435460 978 ntBASIC21.36■■□□□ 1.01
CCDC196A0A1B0GTZ2 HOMER2P1-201ENST00000455653 964 ntBASIC21.36■■□□□ 1.01
CCDC196A0A1B0GTZ2 RASA4DP-201ENST00000460726 1199 ntBASIC21.36■■□□□ 1.01
CCDC196A0A1B0GTZ2 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
CCDC196A0A1B0GTZ2 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC21.36■■□□□ 1.01
CCDC196A0A1B0GTZ2 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CCDC196A0A1B0GTZ2 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
CCDC196A0A1B0GTZ2 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC21.36■■□□□ 1.01
CCDC196A0A1B0GTZ2 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC21.36■■□□□ 1.01
CCDC196A0A1B0GTZ2 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
CCDC196A0A1B0GTZ2 AC006011.2-201ENST00000621313 1158 ntBASIC21.36■■□□□ 1.01
CCDC196A0A1B0GTZ2 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CCDC196A0A1B0GTZ2 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CCDC196A0A1B0GTZ2 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC21.36■■□□□ 1.01
CCDC196A0A1B0GTZ2 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CCDC196A0A1B0GTZ2 LETM1P2-201ENST00000597330 2178 ntBASIC21.36■■□□□ 1.01
CCDC196A0A1B0GTZ2 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC21.36■■□□□ 1.01
CCDC196A0A1B0GTZ2 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CCDC196A0A1B0GTZ2 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CCDC196A0A1B0GTZ2 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
CCDC196A0A1B0GTZ2 AC135050.7-201ENST00000624508 2218 ntBASIC21.35■■□□□ 1.01
CCDC196A0A1B0GTZ2 ESPNP-201ENST00000270691 2015 ntBASIC21.35■■□□□ 1.01
CCDC196A0A1B0GTZ2 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC21.35■■□□□ 1.01
CCDC196A0A1B0GTZ2 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CCDC196A0A1B0GTZ2 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CCDC196A0A1B0GTZ2 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CCDC196A0A1B0GTZ2 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CCDC196A0A1B0GTZ2 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CCDC196A0A1B0GTZ2 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC21.35■■□□□ 1.01
CCDC196A0A1B0GTZ2 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CCDC196A0A1B0GTZ2 AC008687.5-201ENST00000593746 558 ntBASIC21.35■■□□□ 1.01
CCDC196A0A1B0GTZ2 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CCDC196A0A1B0GTZ2 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
CCDC196A0A1B0GTZ2 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC21.35■■□□□ 1.01
CCDC196A0A1B0GTZ2 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CCDC196A0A1B0GTZ2 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC21.35■■□□□ 1.01
CCDC196A0A1B0GTZ2 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC21.35■■□□□ 1.01
CCDC196A0A1B0GTZ2 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC21.35■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms