Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC17.39■□□□□ 0.37
CCDC187A0A096LP49 AC139530.3-201ENST00000620344 690 ntBASIC17.39■□□□□ 0.37
CCDC187A0A096LP49 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC187A0A096LP49 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC187A0A096LP49 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC187A0A096LP49 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC187A0A096LP49 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
CCDC187A0A096LP49 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC17.38■□□□□ 0.37
CCDC187A0A096LP49 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC187A0A096LP49 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.38■□□□□ 0.37
CCDC187A0A096LP49 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC187A0A096LP49 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC17.38■□□□□ 0.37
CCDC187A0A096LP49 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC187A0A096LP49 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC17.38■□□□□ 0.37
CCDC187A0A096LP49 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC187A0A096LP49 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.38■□□□□ 0.37
CCDC187A0A096LP49 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC187A0A096LP49 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC187A0A096LP49 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.38■□□□□ 0.37
CCDC187A0A096LP49 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC17.38■□□□□ 0.37
CCDC187A0A096LP49 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC187A0A096LP49 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC17.38■□□□□ 0.37
CCDC187A0A096LP49 RNPS1P1-201ENST00000507437 918 ntBASIC17.38■□□□□ 0.37
CCDC187A0A096LP49 AC073648.2-201ENST00000510116 352 ntBASIC17.38■□□□□ 0.37
CCDC187A0A096LP49 SLC25A1P1-201ENST00000528351 927 ntBASIC17.38■□□□□ 0.37
CCDC187A0A096LP49 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC17.38■□□□□ 0.37
CCDC187A0A096LP49 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
CCDC187A0A096LP49 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC187A0A096LP49 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.38■□□□□ 0.37
CCDC187A0A096LP49 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC187A0A096LP49 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC187A0A096LP49 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC187A0A096LP49 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC187A0A096LP49 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC17.38■□□□□ 0.37
CCDC187A0A096LP49 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC187A0A096LP49 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC187A0A096LP49 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC187A0A096LP49 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC187A0A096LP49 MTMR9LP-203ENST00000426597 1545 ntBASIC17.37■□□□□ 0.37
CCDC187A0A096LP49 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC187A0A096LP49 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC187A0A096LP49 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.37■□□□□ 0.37
CCDC187A0A096LP49 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC187A0A096LP49 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
CCDC187A0A096LP49 HIST2H3DP1-201ENST00000401004 416 ntBASIC17.37■□□□□ 0.37
CCDC187A0A096LP49 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC17.37■□□□□ 0.37
CCDC187A0A096LP49 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC187A0A096LP49 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.37■□□□□ 0.37
CCDC187A0A096LP49 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC17.37■□□□□ 0.37
CCDC187A0A096LP49 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC17.37■□□□□ 0.37
CCDC187A0A096LP49 AC148477.8-201ENST00000624298 468 ntBASIC17.37■□□□□ 0.37
CCDC187A0A096LP49 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC187A0A096LP49 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CCDC187A0A096LP49 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CCDC187A0A096LP49 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC187A0A096LP49 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
CCDC187A0A096LP49 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CCDC187A0A096LP49 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC187A0A096LP49 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC17.37■□□□□ 0.37
CCDC187A0A096LP49 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC187A0A096LP49 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC187A0A096LP49 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC187A0A096LP49 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CCDC187A0A096LP49 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC187A0A096LP49 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC17.36■□□□□ 0.37
CCDC187A0A096LP49 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC17.36■□□□□ 0.37
CCDC187A0A096LP49 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
CCDC187A0A096LP49 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC187A0A096LP49 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC17.36■□□□□ 0.37
CCDC187A0A096LP49 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC187A0A096LP49 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.36■□□□□ 0.37
CCDC187A0A096LP49 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC17.36■□□□□ 0.37
CCDC187A0A096LP49 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC17.36■□□□□ 0.37
CCDC187A0A096LP49 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC17.36■□□□□ 0.37
CCDC187A0A096LP49 AL355877.3-201ENST00000622820 899 ntBASIC17.36■□□□□ 0.37
CCDC187A0A096LP49 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC187A0A096LP49 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC187A0A096LP49 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC187A0A096LP49 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC17.36■□□□□ 0.37
CCDC187A0A096LP49 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC17.36■□□□□ 0.37
CCDC187A0A096LP49 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC187A0A096LP49 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC17.35■□□□□ 0.37
CCDC187A0A096LP49 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.35■□□□□ 0.37
CCDC187A0A096LP49 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC187A0A096LP49 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC187A0A096LP49 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC187A0A096LP49 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC187A0A096LP49 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC187A0A096LP49 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
CCDC187A0A096LP49 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC17.35■□□□□ 0.37
CCDC187A0A096LP49 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC187A0A096LP49 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
CCDC187A0A096LP49 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC17.35■□□□□ 0.37
CCDC187A0A096LP49 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC187A0A096LP49 RCN1P2-201ENST00000398357 915 ntBASIC17.35■□□□□ 0.37
CCDC187A0A096LP49 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC17.35■□□□□ 0.37
CCDC187A0A096LP49 RBM17P3-201ENST00000417687 1192 ntBASIC17.35■□□□□ 0.37
CCDC187A0A096LP49 AC018712.1-201ENST00000455767 687 ntBASIC17.35■□□□□ 0.37
CCDC187A0A096LP49 AC106730.1-201ENST00000566722 1090 ntBASIC17.35■□□□□ 0.37
CCDC187A0A096LP49 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms