Protein–RNA interactions for Protein: Q9Y6K1

DNMT3A, DNA (cytosine-5)-methyltransferase 3A, humanhuman

Predicted RBP Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3AQ9Y6K1 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.03■□□□□ 0.48
DNMT3AQ9Y6K1 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
DNMT3AQ9Y6K1 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
DNMT3AQ9Y6K1 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
DNMT3AQ9Y6K1 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.02■□□□□ 0.48
DNMT3AQ9Y6K1 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
DNMT3AQ9Y6K1 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
DNMT3AQ9Y6K1 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.02■□□□□ 0.48
DNMT3AQ9Y6K1 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
DNMT3AQ9Y6K1 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
DNMT3AQ9Y6K1 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
DNMT3AQ9Y6K1 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.02■□□□□ 0.48
DNMT3AQ9Y6K1 UROS-202ENST00000368778 1556 ntTSL 2 BASIC18.02■□□□□ 0.48
DNMT3AQ9Y6K1 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
DNMT3AQ9Y6K1 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
DNMT3AQ9Y6K1 SPDYE13P-201ENST00000445314 798 ntBASIC18.02■□□□□ 0.48
DNMT3AQ9Y6K1 CD320-202ENST00000537716 1119 ntTSL 2 BASIC18.02■□□□□ 0.48
DNMT3AQ9Y6K1 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.02■□□□□ 0.48
DNMT3AQ9Y6K1 AC091076.1-201ENST00000610741 619 ntBASIC18.02■□□□□ 0.48
DNMT3AQ9Y6K1 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
DNMT3AQ9Y6K1 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
DNMT3AQ9Y6K1 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC18.02■□□□□ 0.47
DNMT3AQ9Y6K1 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
DNMT3AQ9Y6K1 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
DNMT3AQ9Y6K1 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC18.02■□□□□ 0.47
DNMT3AQ9Y6K1 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.02■□□□□ 0.47
DNMT3AQ9Y6K1 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
DNMT3AQ9Y6K1 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
DNMT3AQ9Y6K1 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
DNMT3AQ9Y6K1 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
DNMT3AQ9Y6K1 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
DNMT3AQ9Y6K1 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
DNMT3AQ9Y6K1 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
DNMT3AQ9Y6K1 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
DNMT3AQ9Y6K1 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC18.01■□□□□ 0.47
DNMT3AQ9Y6K1 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
DNMT3AQ9Y6K1 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC18.01■□□□□ 0.47
DNMT3AQ9Y6K1 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18.01■□□□□ 0.47
DNMT3AQ9Y6K1 VENTXP5-201ENST00000523979 775 ntBASIC18.01■□□□□ 0.47
DNMT3AQ9Y6K1 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC18.01■□□□□ 0.47
DNMT3AQ9Y6K1 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
DNMT3AQ9Y6K1 LITAF-220ENST00000620789 692 ntTSL 5 BASIC18.01■□□□□ 0.47
DNMT3AQ9Y6K1 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
DNMT3AQ9Y6K1 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
DNMT3AQ9Y6K1 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.01■□□□□ 0.47
DNMT3AQ9Y6K1 AC120498.9-201ENST00000339021 3867 ntBASIC18.01■□□□□ 0.47
DNMT3AQ9Y6K1 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.01■□□□□ 0.47
DNMT3AQ9Y6K1 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
DNMT3AQ9Y6K1 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.01■□□□□ 0.47
DNMT3AQ9Y6K1 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
DNMT3AQ9Y6K1 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC18.01■□□□□ 0.47
DNMT3AQ9Y6K1 AC005332.1-201ENST00000577698 1310 ntBASIC18■□□□□ 0.47
DNMT3AQ9Y6K1 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
DNMT3AQ9Y6K1 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
DNMT3AQ9Y6K1 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC18■□□□□ 0.47
DNMT3AQ9Y6K1 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
DNMT3AQ9Y6K1 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
DNMT3AQ9Y6K1 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18■□□□□ 0.47
DNMT3AQ9Y6K1 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18■□□□□ 0.47
DNMT3AQ9Y6K1 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
DNMT3AQ9Y6K1 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC18■□□□□ 0.47
DNMT3AQ9Y6K1 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC18■□□□□ 0.47
DNMT3AQ9Y6K1 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC18■□□□□ 0.47
DNMT3AQ9Y6K1 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC18■□□□□ 0.47
DNMT3AQ9Y6K1 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC18■□□□□ 0.47
DNMT3AQ9Y6K1 PCED1CP-201ENST00000419887 785 ntBASIC18■□□□□ 0.47
DNMT3AQ9Y6K1 KRT18P48-201ENST00000434763 852 ntBASIC18■□□□□ 0.47
DNMT3AQ9Y6K1 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC18■□□□□ 0.47
DNMT3AQ9Y6K1 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC18■□□□□ 0.47
DNMT3AQ9Y6K1 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
DNMT3AQ9Y6K1 NAA38-203ENST00000575071 553 ntTSL 2 BASIC18■□□□□ 0.47
DNMT3AQ9Y6K1 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
DNMT3AQ9Y6K1 AC116407.4-201ENST00000623319 1061 ntBASIC18■□□□□ 0.47
DNMT3AQ9Y6K1 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC18■□□□□ 0.47
DNMT3AQ9Y6K1 AP000550.4-202ENST00000639755 178 ntBASIC18■□□□□ 0.47
DNMT3AQ9Y6K1 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
DNMT3AQ9Y6K1 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18■□□□□ 0.47
DNMT3AQ9Y6K1 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18■□□□□ 0.47
DNMT3AQ9Y6K1 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
DNMT3AQ9Y6K1 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18■□□□□ 0.47
DNMT3AQ9Y6K1 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
DNMT3AQ9Y6K1 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
DNMT3AQ9Y6K1 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
DNMT3AQ9Y6K1 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.99■□□□□ 0.47
DNMT3AQ9Y6K1 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC17.99■□□□□ 0.47
DNMT3AQ9Y6K1 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.99■□□□□ 0.47
DNMT3AQ9Y6K1 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
DNMT3AQ9Y6K1 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
DNMT3AQ9Y6K1 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
DNMT3AQ9Y6K1 AL645929.1-201ENST00000420084 975 ntBASIC17.99■□□□□ 0.47
DNMT3AQ9Y6K1 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC17.99■□□□□ 0.47
DNMT3AQ9Y6K1 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC17.99■□□□□ 0.47
DNMT3AQ9Y6K1 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC17.99■□□□□ 0.47
DNMT3AQ9Y6K1 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
DNMT3AQ9Y6K1 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
DNMT3AQ9Y6K1 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.99■□□□□ 0.47
DNMT3AQ9Y6K1 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.99■□□□□ 0.47
DNMT3AQ9Y6K1 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
DNMT3AQ9Y6K1 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.99■□□□□ 0.47
DNMT3AQ9Y6K1 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms