Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
CTDP1Q9Y5B0 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CTDP1Q9Y5B0 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC21.27■■□□□ 1
CTDP1Q9Y5B0 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CTDP1Q9Y5B0 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC21.27■■□□□ 1
CTDP1Q9Y5B0 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC21.27■■□□□ 1
CTDP1Q9Y5B0 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC21.27■■□□□ 1
CTDP1Q9Y5B0 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC21.27■■□□□ 1
CTDP1Q9Y5B0 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
CTDP1Q9Y5B0 DRAXINP1-201ENST00000437611 948 ntBASIC21.27■■□□□ 1
CTDP1Q9Y5B0 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC21.27■■□□□ 1
CTDP1Q9Y5B0 PPOX-214ENST00000535223 664 ntTSL 3 BASIC21.27■■□□□ 1
CTDP1Q9Y5B0 CIB2-208ENST00000560618 804 ntTSL 2 BASIC21.27■■□□□ 1
CTDP1Q9Y5B0 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
CTDP1Q9Y5B0 TPSP2-201ENST00000561760 610 ntBASIC21.27■■□□□ 1
CTDP1Q9Y5B0 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC21.27■■□□□ 1
CTDP1Q9Y5B0 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC21.27■■□□□ 1
CTDP1Q9Y5B0 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
CTDP1Q9Y5B0 MTMR9LP-203ENST00000426597 1545 ntBASIC21.27■■□□□ 1
CTDP1Q9Y5B0 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
CTDP1Q9Y5B0 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
CTDP1Q9Y5B0 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC21.27■■□□□ 1
CTDP1Q9Y5B0 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC21.27■■□□□ 1
CTDP1Q9Y5B0 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CTDP1Q9Y5B0 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
CTDP1Q9Y5B0 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC21.26■□□□□ 0.99
CTDP1Q9Y5B0 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
CTDP1Q9Y5B0 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CTDP1Q9Y5B0 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CTDP1Q9Y5B0 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
CTDP1Q9Y5B0 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
CTDP1Q9Y5B0 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC21.26■□□□□ 0.99
CTDP1Q9Y5B0 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
CTDP1Q9Y5B0 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
CTDP1Q9Y5B0 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CTDP1Q9Y5B0 IGHGP-201ENST00000390555 1178 ntBASIC21.26■□□□□ 0.99
CTDP1Q9Y5B0 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CTDP1Q9Y5B0 NUS1P1-201ENST00000446295 882 ntBASIC21.26■□□□□ 0.99
CTDP1Q9Y5B0 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
CTDP1Q9Y5B0 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC21.26■□□□□ 0.99
CTDP1Q9Y5B0 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC21.26■□□□□ 0.99
CTDP1Q9Y5B0 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
CTDP1Q9Y5B0 LINC01711-201ENST00000598340 967 ntBASIC21.26■□□□□ 0.99
CTDP1Q9Y5B0 AC083906.6-201ENST00000641366 219 ntBASIC21.26■□□□□ 0.99
CTDP1Q9Y5B0 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CTDP1Q9Y5B0 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CTDP1Q9Y5B0 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC21.26■□□□□ 0.99
CTDP1Q9Y5B0 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CTDP1Q9Y5B0 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CTDP1Q9Y5B0 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CTDP1Q9Y5B0 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CTDP1Q9Y5B0 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
CTDP1Q9Y5B0 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
CTDP1Q9Y5B0 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
CTDP1Q9Y5B0 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC21.26■□□□□ 0.99
CTDP1Q9Y5B0 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CTDP1Q9Y5B0 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC21.26■□□□□ 0.99
CTDP1Q9Y5B0 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CTDP1Q9Y5B0 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CTDP1Q9Y5B0 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CTDP1Q9Y5B0 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CTDP1Q9Y5B0 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CTDP1Q9Y5B0 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CTDP1Q9Y5B0 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC21.25■□□□□ 0.99
CTDP1Q9Y5B0 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC21.25■□□□□ 0.99
CTDP1Q9Y5B0 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC21.25■□□□□ 0.99
CTDP1Q9Y5B0 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC21.25■□□□□ 0.99
CTDP1Q9Y5B0 AC104819.1-201ENST00000504587 486 ntBASIC21.25■□□□□ 0.99
CTDP1Q9Y5B0 SKP2-204ENST00000508514 821 ntTSL 3 BASIC21.25■□□□□ 0.99
CTDP1Q9Y5B0 TEN1-204ENST00000588202 862 ntTSL 3 BASIC21.25■□□□□ 0.99
CTDP1Q9Y5B0 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC21.25■□□□□ 0.99
CTDP1Q9Y5B0 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CTDP1Q9Y5B0 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CTDP1Q9Y5B0 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CTDP1Q9Y5B0 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CTDP1Q9Y5B0 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
CTDP1Q9Y5B0 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CTDP1Q9Y5B0 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CTDP1Q9Y5B0 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CTDP1Q9Y5B0 AL163051.1-201ENST00000569214 1512 ntBASIC21.24■□□□□ 0.99
CTDP1Q9Y5B0 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC21.24■□□□□ 0.99
CTDP1Q9Y5B0 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC21.24■□□□□ 0.99
CTDP1Q9Y5B0 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
CTDP1Q9Y5B0 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC21.24■□□□□ 0.99
CTDP1Q9Y5B0 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC21.24■□□□□ 0.99
CTDP1Q9Y5B0 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC21.24■□□□□ 0.99
CTDP1Q9Y5B0 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CTDP1Q9Y5B0 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CTDP1Q9Y5B0 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CTDP1Q9Y5B0 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CTDP1Q9Y5B0 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC21.24■□□□□ 0.99
CTDP1Q9Y5B0 AC004870.1-201ENST00000315132 882 ntBASIC21.24■□□□□ 0.99
CTDP1Q9Y5B0 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CTDP1Q9Y5B0 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC21.24■□□□□ 0.99
CTDP1Q9Y5B0 MPI-205ENST00000562606 1052 ntTSL 3 BASIC21.24■□□□□ 0.99
CTDP1Q9Y5B0 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CTDP1Q9Y5B0 AC124864.1-201ENST00000623408 392 ntBASIC21.24■□□□□ 0.99
CTDP1Q9Y5B0 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CTDP1Q9Y5B0 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
CTDP1Q9Y5B0 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms