Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
PCDHB16Q9NRJ7 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
PCDHB16Q9NRJ7 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
PCDHB16Q9NRJ7 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PCDHB16Q9NRJ7 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
PCDHB16Q9NRJ7 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PCDHB16Q9NRJ7 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC16.02■□□□□ 0.15
PCDHB16Q9NRJ7 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.02■□□□□ 0.15
PCDHB16Q9NRJ7 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.15
PCDHB16Q9NRJ7 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PCDHB16Q9NRJ7 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
PCDHB16Q9NRJ7 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PCDHB16Q9NRJ7 AC112777.1-201ENST00000540175 1423 ntBASIC16.02■□□□□ 0.15
PCDHB16Q9NRJ7 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PCDHB16Q9NRJ7 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHB16Q9NRJ7 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHB16Q9NRJ7 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC16.01■□□□□ 0.15
PCDHB16Q9NRJ7 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHB16Q9NRJ7 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHB16Q9NRJ7 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC16.01■□□□□ 0.15
PCDHB16Q9NRJ7 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHB16Q9NRJ7 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHB16Q9NRJ7 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC16.01■□□□□ 0.15
PCDHB16Q9NRJ7 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.01■□□□□ 0.15
PCDHB16Q9NRJ7 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHB16Q9NRJ7 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHB16Q9NRJ7 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
PCDHB16Q9NRJ7 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHB16Q9NRJ7 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHB16Q9NRJ7 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHB16Q9NRJ7 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC16.01■□□□□ 0.15
PCDHB16Q9NRJ7 ESRRAP1-201ENST00000400596 1257 ntBASIC16.01■□□□□ 0.15
PCDHB16Q9NRJ7 DERL1-203ENST00000419562 918 ntTSL 2 BASIC16.01■□□□□ 0.15
PCDHB16Q9NRJ7 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHB16Q9NRJ7 FAM201B-201ENST00000458407 597 ntBASIC16.01■□□□□ 0.15
PCDHB16Q9NRJ7 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHB16Q9NRJ7 DENND3-207ENST00000518347 850 ntTSL 2 BASIC16.01■□□□□ 0.15
PCDHB16Q9NRJ7 MMAB-206ENST00000540016 945 ntTSL 3 BASIC16.01■□□□□ 0.15
PCDHB16Q9NRJ7 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC16.01■□□□□ 0.15
PCDHB16Q9NRJ7 AC110285.5-201ENST00000611501 352 ntBASIC16.01■□□□□ 0.15
PCDHB16Q9NRJ7 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHB16Q9NRJ7 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHB16Q9NRJ7 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC16.01■□□□□ 0.15
PCDHB16Q9NRJ7 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHB16Q9NRJ7 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHB16Q9NRJ7 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC16.01■□□□□ 0.15
PCDHB16Q9NRJ7 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
PCDHB16Q9NRJ7 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC16.01■□□□□ 0.15
PCDHB16Q9NRJ7 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHB16Q9NRJ7 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHB16Q9NRJ7 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHB16Q9NRJ7 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
PCDHB16Q9NRJ7 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHB16Q9NRJ7 KRT8P3-201ENST00000519669 1449 ntBASIC16.01■□□□□ 0.15
PCDHB16Q9NRJ7 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
PCDHB16Q9NRJ7 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.01■□□□□ 0.15
PCDHB16Q9NRJ7 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC16■□□□□ 0.15
PCDHB16Q9NRJ7 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
PCDHB16Q9NRJ7 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHB16Q9NRJ7 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHB16Q9NRJ7 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
PCDHB16Q9NRJ7 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
PCDHB16Q9NRJ7 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHB16Q9NRJ7 FST-202ENST00000396947 2538 ntTSL 5 BASIC16■□□□□ 0.15
PCDHB16Q9NRJ7 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHB16Q9NRJ7 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
PCDHB16Q9NRJ7 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
PCDHB16Q9NRJ7 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC16■□□□□ 0.15
PCDHB16Q9NRJ7 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHB16Q9NRJ7 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHB16Q9NRJ7 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHB16Q9NRJ7 AL353807.1-201ENST00000427475 662 ntBASIC16■□□□□ 0.15
PCDHB16Q9NRJ7 POU5F1P3-201ENST00000428824 1078 ntBASIC16■□□□□ 0.15
PCDHB16Q9NRJ7 AC133681.1-201ENST00000465482 601 ntBASIC16■□□□□ 0.15
PCDHB16Q9NRJ7 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHB16Q9NRJ7 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC16■□□□□ 0.15
PCDHB16Q9NRJ7 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
PCDHB16Q9NRJ7 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC16■□□□□ 0.15
PCDHB16Q9NRJ7 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC16■□□□□ 0.15
PCDHB16Q9NRJ7 AL023875.1-201ENST00000640777 796 ntBASIC16■□□□□ 0.15
PCDHB16Q9NRJ7 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16■□□□□ 0.15
PCDHB16Q9NRJ7 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC16■□□□□ 0.15
PCDHB16Q9NRJ7 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHB16Q9NRJ7 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHB16Q9NRJ7 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC16■□□□□ 0.15
PCDHB16Q9NRJ7 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHB16Q9NRJ7 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC16■□□□□ 0.15
PCDHB16Q9NRJ7 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC16■□□□□ 0.15
PCDHB16Q9NRJ7 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHB16Q9NRJ7 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC16■□□□□ 0.15
PCDHB16Q9NRJ7 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
PCDHB16Q9NRJ7 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
PCDHB16Q9NRJ7 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC16■□□□□ 0.15
PCDHB16Q9NRJ7 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
PCDHB16Q9NRJ7 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHB16Q9NRJ7 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHB16Q9NRJ7 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
PCDHB16Q9NRJ7 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHB16Q9NRJ7 FER1L4-210ENST00000615531 5998 ntBASIC15.99■□□□□ 0.15
PCDHB16Q9NRJ7 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms